Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01313 ATGGGTTCCGAAGCTGATGACACGAAAATCGATACCACAACACAAACAGTTCAAACTCATTTTGTTTTACCTGAAAATCACGCTAACGGCCAAGAAACCGTTACTAACAACAACAACCAAATTACTAGTTCCCACCATGGAGGTGCAGATAGCAAAAACGATGATAACGCAGGGTTTATGTTTATTCATCATCATTCACTTCTTCCGGTTCCAGTTCCGCCGGAGATTTATCAAAGCAACAAAAACAACGAATCTCCGACTAGTCTCTCCGTTGCCGGAACCATGCCGGATTTCGGAACCTTCATCCGTCAGCGTAGCAACGATTTATCGGCTGCGATTGCAAAACGAGTTTCATCGTTTCGTCAATCGATGGAGGAGAATTCGAATTCGAACTCGAACACGAACTCCAACGAGGTTGTGAATAATGATCGGTATCAGGAAGTGACGGAGTATAATCTCTCAGGACTCAAAGTTTTTGTGAAGGTGAAACCGGAAGAAGAATCGGAGATGAAAGGAAGAATCACGTTCTTCTCGAGATCAGGTTGCAGAGATTGTACGGCGGTGAGAAGATTCTTCAAAGAGAAAGAGATTAAGTTCGTTGAAATCAACGTCGATGTGTTTCGTGAGAGAGAGAAAGAGTTACGCGAACGAACGGGAAATGTTACGGTGCCGATGATTTTCTTCAACGAGAAGCTTATTGGAGGATTGGTGGCGTTGAATTCGCTGAGAAATAGTGGTGAATTTGAACGGAGGTTGACGGAGATGGTGGTTGAGAAATTTGCCGGCGATGATGCACCGCTACCGCCGGTGTACGGTTATGATTATGTTGAAGATTATCGGACGGATGAGATGGTTGGAGTTGTTAGGATTTTACGGGATAAATTGTTGATTCAAGATCGGTTGCGGAGAATGAAAATTGTTAAGAATTGTTTTGAAGGGAACGAGTTTGTGGAGGTTGTTGTTCAACACTTCAAGTGCGCGCGTAACGAGGCTGTTGATATTGGAAAAGAGTTGTCCAGGAAGCACTTCATCCATCATGTTTTTGGGGAAAATGATTTTGAAGAGGGAAACCACTTTTATCGTTTCCTGGAGCATGAACCCTTTATCCCCAAATGCTTTAATTTCCATGGTGTTGTAAATGACAAGGAACCAAAGACAGCAGCTTCAATTTGTGAAAGGCTTACCAAGATTATGTCTGCCATTCTTGAGTCTTATGCTTCTGATGATAGGCAACATGTTGATTATGTAGCCATTAGCAAAAGCGAAGAATTTCGTAGGTATCTAAACATGACTCAGGATCTGCAGCGAGTAAATATCTGTGAACTATCAGAAAATGAGAAGCTTGCCTTCTTCTTAAATTTGTATAATGCCATGGTCATCCATGCTGTAATTAGCGTAGGGAGTCCAGAAGGTGTTATTGATAGGAGATCTTTTTTCAATGACTTCCTGTATTTGATTGGAGGACATCCTTATTCACTAGCCATCATTGAAAATGGTATTCTCAGATGTAATCAGAGGTCACCATATTCCTTAATGAAGCCCTTTAGCACTGGAGATAAGCGGTTAGAGGTTGCTCTTGTCAAGTTGAACCCGTTATTTCACTTTGGACTTTGTAATGGTACAAAATCTAGCTCAAACGTGAGGTTCTTTTCACCTAATAGAGTTGTAGATGAATTAAGAGGTGCTGCAAGAGAGTTCTTTGAAAATGATAGAATTGAAGTGGACCTAGAGAAGAGAACGGTTCATCTCCCGCGGATTTTCAAGTGGTTCGGTGGCGATTTTGGACAGGAGAAAGATATGCTACTTAAGTGGATACTTAATTACTTGAATCCAAATAAAGCAGGTCTTGTGACACATCTCTTGAGTGATAGTGAACCTGTTAATATATCATACCAGAATTTTGATTGGTCAATAAATTCTTGA 1923 0.4119 MGSEADDTKIDTTTQTVQTHFVLPENHANGQETVTNNNNQITSSHHGGADSKNDDNAGFMFIHHHSLLPVPVPPEIYQSNKNNESPTSLSVAGTMPDFGTFIRQRSNDLSAAIAKRVSSFRQSMEENSNSNSNTNSNEVVNNDRYQEVTEYNLSGLKVFVKVKPEEESEMKGRITFFSRSGCRDCTAVRRFFKEKEIKFVEINVDVFREREKELRERTGNVTVPMIFFNEKLIGGLVALNSLRNSGEFERRLTEMVVEKFAGDDAPLPPVYGYDYVEDYRTDEMVGVVRILRDKLLIQDRLRRMKIVKNCFEGNEFVEVVVQHFKCARNEAVDIGKELSRKHFIHHVFGENDFEEGNHFYRFLEHEPFIPKCFNFHGVVNDKEPKTAASICERLTKIMSAILESYASDDRQHVDYVAISKSEEFRRYLNMTQDLQRVNICELSENEKLAFFLNLYNAMVIHAVISVGSPEGVIDRRSFFNDFLYLIGGHPYSLAIIENGILRCNQRSPYSLMKPFSTGDKRLEVALVKLNPLFHFGLCNGTKSSSNVRFFSPNRVVDELRGAAREFFENDRIEVDLEKRTVHLPRIFKWFGGDFGQEKDMLLKWILNYLNPNKAGLVTHLLSDSEPVNISYQNFDWSINS 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01313 640 MobiDBLite consensus disorder prediction 122 141 - -
Trre15g01313 640 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 25 639 - -
Trre15g01313 640 ProSiteProfiles DEP domain profile. 291 364 IPR000591 GO:0035556
Trre15g01313 640 SMART DEP_3 291 364 IPR000591 GO:0035556
Trre15g01313 640 CDD DEP 283 361 - -
Trre15g01313 640 MobiDBLite consensus disorder prediction 26 47 - -
Trre15g01313 640 SUPERFAMILY Thioredoxin-like 172 254 IPR036249 -
Trre15g01313 640 Gene3D Glutaredoxin 169 256 - -
Trre15g01313 640 Gene3D - 279 414 IPR036388 -
Trre15g01313 640 SUPERFAMILY "Winged helix" DNA-binding domain 281 378 IPR036390 -
Trre15g01313 640 ProSiteProfiles Glutaredoxin domain profile. 162 259 - -
Trre15g01313 640 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 296 362 IPR000591 GO:0035556
Trre15g01313 640 Pfam Glutaredoxin 174 233 IPR002109 -
Trre15g01313 640 Pfam Protein of unknown function, DUF547 441 566 IPR006869 -
Trre15g01313 640 Coils Coil 197 217 - -
Trre15g01313 640 MobiDBLite consensus disorder prediction 26 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01313 Trre-Chr15 10213663 10218393 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01313 - - gmx:100810111 899.812