Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01299 ATGGAGGCTTATAAAAGATGGGTTAGACAGAACAAAGAATATGTGCACTCTTTAGAATCTCTGGCCAATGGATTGACATGGCTTCTTCCTGAACGATTTTCTGAATCAGAGATTGGACCAGAAGCAGTGACAACAATTTTGGGAATCATCACAGCTTTCAATGAACATGTAATTGATACTGCTCCTAACCAAAATATTACAGGCTCTGTTGAGCCTAATTCATTTCCATATCCATTATGCTTATCCGCAATAAAGGATGTTGAAACGTTAGTTGAAGTCGTGGCACAACATTACTATGGTGATGATAAGAAATGGAATTTCCTTGCTGTTACCGAAGCAACCAAGGTACTAGTTCAATTATCTTTGTTTCGAAAGAGTGGATATAAAATGTTGTTACATGGAGGGGAGACATCTAATGATGCGATGCATTCAAATGATTCTTCTACTTCACAACATCAAATAGCCGTAAACCCGAAAGCGCGTTATAATCACGGAACAAACCCGTGGAATCTGGAAGGAAGAGCATTGTCTGCTTTAAGTCAATTTGGAGAAAAAGCACGGATCGTGTCAGAACCGGTGTGGTTACGTAGGGTTCATCACCAACAAGCAATCATTGAGCCCACTGCTTCAAGGGTAGTGAAACCTACACTTTCCACCATATTGTCGAAAAAGGGTCTTCGTGGAGCTTTGTTTTTGATTGGAGAAGTTCTATTTATTACTAGACCACTTATTTATGTTTTATTCATTCGAAAATACGGTATTCGATCATGGACCCCTTGGTTCCTTTCACTGGCTATGGATAGCATATCAAACAGTATTCTCTCACTCATTACAACGACAGTGACGGGTGAAAATCAGAAAATGATTCATATTTCCGCCCCAGAAAAGGATGAGGTTAAACGACGGAAGCTGTTATTCGTACTTTACCTAATGAGAGATCCATTTTTCAGCAAATATACAAGGCGAAAACTCGAAAGCACGGAGAAAGTTTTGGAAACAATACCTGTCATAGGATTTCTTACAGCGAAAATTGTCGAGCTTACGATTGGAGCTCAAACACGATACACTTACATGTCAGGATCATGA 1086 0.395 MEAYKRWVRQNKEYVHSLESLANGLTWLLPERFSESEIGPEAVTTILGIITAFNEHVIDTAPNQNITGSVEPNSFPYPLCLSAIKDVETLVEVVAQHYYGDDKKWNFLAVTEATKVLVQLSLFRKSGYKMLLHGGETSNDAMHSNDSSTSQHQIAVNPKARYNHGTNPWNLEGRALSALSQFGEKARIVSEPVWLRRVHHQQAIIEPTASRVVKPTLSTILSKKGLRGALFLIGEVLFITRPLIYVLFIRKYGIRSWTPWFLSLAMDSISNSILSLITTTVTGENQKMIHISAPEKDEVKRRKLLFVLYLMRDPFFSKYTRRKLESTEKVLETIPVIGFLTAKIVELTIGAQTRYTYMSGS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01299 361 PANTHER UNCHARACTERIZED 1 361 IPR013919 -
Trre15g01299 361 Pfam Peroxisomal membrane protein (Pex16) 2 351 IPR013919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01299 Trre-Chr15 10033733 10036811 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01299 K13335 - gmx:100793724 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01299 15 10033733 10036811 Trre15g01299 15 10033733 10036811 ECH