Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01295 ATGGCTCCTTTCAACTCAAGAAAGGGACTAATCTTATGCTCAAAAGACATACTTGATGCAGCTTCATGGTATTGTTCTATTATTCTTGTAGCCCTCATACTTCTAACTATATTTAGAGAAAGTTCATCTATGCTTCAAAATAATCATTGTCACAACATCATAAAGAGCAACAATTTCTTGTCAAATAAACCATATTGTGATGAAATATATGTGGTTGGTGAAGGTGAGACACTTAACACAATTAGTGATAAGTGTAATGATCCTTTTATTGTTGAGAATAATCCTCACATACATGATCCTGATGATGTCTTTCCTGGCCTTGTTATCAAGATTACACCTTCAAATCATCATAGCTAG 357 0.3361 MAPFNSRKGLILCSKDILDAASWYCSIILVALILLTIFRESSSMLQNNHCHNIIKSNNFLSNKPYCDEIYVVGEGETLNTISDKCNDPFIVENNPHIHDPDDVFPGLVIKITPSNHHS 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01295 118 PANTHER EMBRYO SAC 1 18 116 - -
Trre15g01295 118 CDD LysM 69 111 IPR018392 -
Trre15g01295 118 Gene3D LysM domain 52 118 IPR036779 -
Trre15g01295 118 Pfam LysM domain 70 111 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01295 Trre-Chr15 10009746 10010102 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01295 - - tpra:123896033 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01295 15 10009746 10010102 Trre15g01295 15 10009746 10010102 ECH