Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre15g01253 | ATGGAAGGAAAACAAAAAGCATGCACCTTAGAAATCACCATTACTTCCGGACAAAACATATGCGTCGAGCGAAATTCAAAGGCAGAAGATGTATATGTTGTTGTTCGTGCTGAGTCTCTCAACTCTTGCACGACAAAAATGGTGAACGAAAATGAGGGTTTACTTTCATGGGACGAGAAATTCATGTTAGATATTCCTTCACATGCAAAGTCAATGACGTTTGAGGTACAATGCAAGAAGTACAAAGGAGCTCGTCCCATTGGAGTTGCTAGGATAGCACTTTCGGATTTTATTGGTGACAATATGTCATTACAAAGTTGTGCTCAAAATTTTAGTTATGGATTGAGGGATTGGGATGGTAGGAAAAATGGTGTTATTAATTTTTCAGTGAGAGAGGTGACACAAGAAGGTAATTTGTGTTTTGATTCTTTGGAAAAAGAACAAGGTGTGGGAGAAAAGAAGGTGAGTTCTAGTGAATTTGAGGGTGCTAAGGATAAAAATAAATCAAGTCATGTTGCCATTGGGATTTCAATTTTGGGTGTCTTGTTTCTCTTAGGGCATTCTCTTTTGTCTTTTATACGTAGAAAGAAATGA | 594 | 0.3754 | MEGKQKACTLEITITSGQNICVERNSKAEDVYVVVRAESLNSCTTKMVNENEGLLSWDEKFMLDIPSHAKSMTFEVQCKKYKGARPIGVARIALSDFIGDNMSLQSCAQNFSYGLRDWDGRKNGVINFSVREVTQEGNLCFDSLEKEQGVGEKKVSSSEFEGAKDKNKSSHVAIGISILGVLFLLGHSLLSFIRRKK | 197 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre15g01253 | 197 | PANTHER | INGRESSION PROTEIN FIC1 | 9 | 145 | - | - | |
| Trre15g01253 | 197 | SMART | C2_3c | 9 | 106 | IPR000008 | - | |
| Trre15g01253 | 197 | Pfam | C2 domain | 9 | 96 | IPR000008 | - | |
| Trre15g01253 | 197 | ProSiteProfiles | C2 domain profile. | 1 | 107 | IPR000008 | - | |
| Trre15g01253 | 197 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 9 | 134 | IPR035892 | - | |
| Trre15g01253 | 197 | Gene3D | C2 domain | 7 | 132 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trre15g01253 | Trre-Chr15 | 9667499 | 9668092 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre15g01253 | - | - | psat:127135632 | 236.113 |