Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01252 ATGTCACGAACTATGGAGATAACAATTTTGTCAGCGGAGAATCTCGAAGAAAACAAAAAGGCAATAAAAGGGAACCTTAACACATTTGTCACGGTTCAATGCGATGGATGCAACGATGAATTGAACGCGACTAAACTTGATTCGAAAGGTGGAAGTTACCCATCATGGAATGAGAAGTTAGTTATGGATGTGCCATTGCATGCAAGGTTCATAACAATAGATGTGAAGTACAAAACAAGAGGAAATAGTAGTACTAGTGTTGGAATGGCTAGAATACCGATTTCAGATTTTATTGGAGGATATGTACATGAAAATCAATTGCAATTTTTAAGTTATAGGTTGTGGGATAGTAGAGTTAGGAGAAATGGGGTTGTAAATATTTCAGTCAGGGTAAAAGTGTCCCAACAAAATTCTTGTTCAAATTTGATGTCATCGACAGTGAATGGAATTCCGGTAACCGGAGTTCCAGTTGCTGGTAATGGCTCCACTGGAGTTGTAACAGGGATTCCAGCTGTTTGGTTAAACTACCAAAGAAACTTTTAA 543 0.3794 MSRTMEITILSAENLEENKKAIKGNLNTFVTVQCDGCNDELNATKLDSKGGSYPSWNEKLVMDVPLHARFITIDVKYKTRGNSSTSVGMARIPISDFIGGYVHENQLQFLSYRLWDSRVRRNGVVNISVRVKVSQQNSCSNLMSSTVNGIPVTGVPVAGNGSTGVVTGIPAVWLNYQRNF 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01252 180 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 112 IPR035892 -
Trre15g01252 180 PANTHER INGRESSION PROTEIN FIC1 2 140 - -
Trre15g01252 180 Pfam C2 domain 4 104 IPR000008 -
Trre15g01252 180 CDD C2_SRC2_like 4 127 IPR044750 GO:0006952
Trre15g01252 180 Gene3D C2 domain 1 114 IPR035892 -
Trre15g01252 180 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Trre15g01252 180 SMART C2_3c 4 106 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01252 Trre-Chr15 9653477 9654019 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01252 - - gmx:100809743 253.062