Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01247 ATGGCGACAAAACCTTCTGTCTCCACCACAACTACCACCGTCGCCGCCGTGCCTGAAACTGTATCGCCGGAAATATCAAAGGCTATGGACCCAAAACACGTTGCTGAAACTCAATTATTTGTTAAGCTTATGAGTATTGGTGCTCCCGTTCCTGAAAACTGCAACACTAATGGCTACTTCGATTCTTTCATTCGTAATTTCATCAAAGTTGATCAAATTCAACGTGGTCGAATCTCTTGTACCATTGTTGCAAAACCACCTATCTGTAATGGCTATGGAACACTGCATGGAGGGGCTGTTGGGTCCTTGGTTGAGGTTCTGACAACTGCTTGTGCTAGAACTGTAGTTGCCGAGAACAAGGAACTTTTTCTCGGGGAAATAAGCATTTCTTACCTCTCTGGCACTCCAATAAATGAAGAAGTGGTAGCTAATGCCTCTGTGGTGAAGAGTGGAAGAAATTTGACTGTAATTGCACTTGAATTTAAACTGAAGAAAACTGGGAATTTGCTTTATCTTACTCATGCTACCTTCTATAACATGCCAGTTTCCAGCTTATGA 558 0.4247 MATKPSVSTTTTTVAAVPETVSPEISKAMDPKHVAETQLFVKLMSIGAPVPENCNTNGYFDSFIRNFIKVDQIQRGRISCTIVAKPPICNGYGTLHGGAVGSLVEVLTTACARTVVAENKELFLGEISISYLSGTPINEEVVANASVVKSGRNLTVIALEFKLKKTGNLLYLTHATFYNMPVSSL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01247 185 Pfam Thioesterase superfamily 92 166 IPR006683 -
Trre15g01247 185 CDD PaaI_thioesterase 68 178 - -
Trre15g01247 185 NCBIfam hotdog fold thioesterase 68 160 IPR003736 -
Trre15g01247 185 FunFam Putative esterase F42H10.6 48 180 - -
Trre15g01247 185 PANTHER THIOESTERASE SUPERFAMILY MEMBER-RELATED 33 182 IPR039298 GO:0047617
Trre15g01247 185 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 68 178 IPR029069 -
Trre15g01247 185 Gene3D Hotdog Thioesterase 50 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01247 Trre-Chr15 9602004 9606927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01247 K17362 - gmx:100499764 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01247 15 9602004 9606927 Trre15g01247 15 9602004 9606927 ECH