Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01206 ATGGAACCTCAGGACGGAGAAGAGATTCATAATTGTTTGATAAAGCTGAGAAGTAATCCCAAAAGGCGAAGGGATAAGGTTTACATTGGCTGTGGAGCAGGATTTGGTGGTGACAGGCCGCTGGCTGCTCTTAAGTTGCTGCAAAGAGTCCAAGAACTAAATTATCTGGTCCTTGAATGCCTGGCGGAGCGTACTCTAGCCGATCGCTATCAAGTCATGTTGTCTGGTGGTGATGGTTATGATTCTCAGATTTCTAATTGGATGAATGTGCTTCTGCCTCTGGCTTTGGAAAGAGGAACTTGCATAATTACCAATATGGGTGCTATGGATCCTATTGGTGCTCAACAGAAGGTCTTGGAAATAGCTACCACACTAGGGCTTGATGTTTTGGTCGCTGTTGCTCATGAGCTGTCTGTTACAAACTTAGGTTCAGGATTTTCACCTACACAAAGTTATATCATGGAGGGTGGTATCAGCACCTACTTGGGAGCTGCTCCTATTGTTCACTGCCTTGAAAAGTACCAACCAAATGTTATAATTACATCAAGAATTGCAGATGCCGCTTTATTCTTAGCACCTATGGTTTATGAACTAGGTTGGAACTGGGATGAGTTAGGGCATCTAGCTCAAGGATCTCTGGCTGGCCATCTTCTAGAGTGTGGTTGTCAACTCACCGGGGGATATTTCATGCATCCAGGAGACAAGTACCGAGATATGTCATTCCAGCAACTACTGGATTTATCACTTCCTTATGCCGAAGTACGTTTCGATGGACAAGTGTGTGTAGCAAAGGCTGAAGGTAGTGGTGGAGTTTTGAATTTCAATACATGTGCTGAACAATTACTCTATGAGATTGGTGACCCCAGCTCTTATGTGACTCCTGATGTAGTCATCGACTTTCAGGATGTTTCCTTCCTTCCATTGTCAAGCTGCAGAGTTCTTTGCCTTGGGGCAAAACCATCTACTATATCAGTACCTGATAAACTTTTGCAGTTGGTTCCAAAGGATTGTGGATGGAAAGGATGGGGAGAGATATCTTATGGAGGCTATGAATGTGTTCAACGTGCTAAAGCAGCTGAATATCTGGTTAGATCATGGATGGAAGAAATATTTCCTGGTCTTAATCACCGTATACTTTCGTATATAATTGGGCATGATAGCCTCAAAGCTACTAGCAGCAATGGAAATGCTTCACCACAGAGAACTAGTGACGATATTAGGTTACGCATGGATGGACTTTTTGAGCAGAAGGAATATGCTGTCCAATTTACTAGAGAATTTACAGCATTGTATACAAATGGACCAGCTGGTGGTGGGGGTATCAGTACTGGATATAAGAAAGAGATTCTTCTAGAAAAACATTTGGTTAAGCGTGAAGATGTTTCCTGGCGAATCGGGTTGAAGAGAAACATAAAAAGCCAGTCAAATGAAGCAGTTGATCATGAATACAAATACAATCCAAAGCACATATCGACAATGCAACCAAAGTCACTAGCCAAAACCGATAAATCCTCCGCGGAATTTGTTTCGCTTTGTAGAAGTAGCACTCCTGCTCCATCAGGTCAGAAGATTCCACTTTACAATGTAGCACATAGCAGAGCTGGAGATAAAGGAAATGACATAAATTTTTCTCTCATCCCACATTTTCCTCCTGATATTAAGAGGTTGAAACCAATTATCACATCTCAATGGATAAAATCAGTGGTTTCACCTCTTCTGGATTTGTCTCCTTCTTCTGATTTAGTTACAACAGATCAAAGAGATAATTGGGTCAATGAAAATGTTAAAGTGGATATATATGAAGTTAAGGGAATCCAATCATTGAATATTGTTGTCAGGAACATCCTAGACGGCGGTGTCAACTGTTCGCGAAGAATTGATCGGCATGGAAAGACCATTTCGGATCTCATATTGTGCCAACAGGTTGTGTTACCTTCATGA 1941 0.4173 MEPQDGEEIHNCLIKLRSNPKRRRDKVYIGCGAGFGGDRPLAALKLLQRVQELNYLVLECLAERTLADRYQVMLSGGDGYDSQISNWMNVLLPLALERGTCIITNMGAMDPIGAQQKVLEIATTLGLDVLVAVAHELSVTNLGSGFSPTQSYIMEGGISTYLGAAPIVHCLEKYQPNVIITSRIADAALFLAPMVYELGWNWDELGHLAQGSLAGHLLECGCQLTGGYFMHPGDKYRDMSFQQLLDLSLPYAEVRFDGQVCVAKAEGSGGVLNFNTCAEQLLYEIGDPSSYVTPDVVIDFQDVSFLPLSSCRVLCLGAKPSTISVPDKLLQLVPKDCGWKGWGEISYGGYECVQRAKAAEYLVRSWMEEIFPGLNHRILSYIIGHDSLKATSSNGNASPQRTSDDIRLRMDGLFEQKEYAVQFTREFTALYTNGPAGGGGISTGYKKEILLEKHLVKREDVSWRIGLKRNIKSQSNEAVDHEYKYNPKHISTMQPKSLAKTDKSSAEFVSLCRSSTPAPSGQKIPLYNVAHSRAGDKGNDINFSLIPHFPPDIKRLKPIITSQWIKSVVSPLLDLSPSSDLVTTDQRDNWVNENVKVDIYEVKGIQSLNIVVRNILDGGVNCSRRIDRHGKTISDLILCQQVVLPS 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01206 646 Pfam Acyclic terpene utilisation family protein AtuA 29 370 IPR010839 -
Trre15g01206 646 PANTHER PROPIONYL-COA CARBOXYLASE 1 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01206 Trre-Chr15 9403819 9408950 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01206 - - gmx:100790647 1112.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01206 15 9403819 9408950 Trre15g01206 15 9403819 9408950 ECH