Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01203 ATGGCTTCTTCAGAAGAAAACAGTTTGGGAAAAAGGGTATCTGAAAAGGTTATTTCTTCATACAATTCTCTTTCAAAGAAAGGCAAACCTCAAGGCCGTGAAGTCACTGTTTTGGCTGCTTTCCTTCTCTCTTCTCCTTCCAATGAGTTGAAGGTTATTGCACTTGGAACTGGAACAAAATGTATTGGACGTTCTCTTTTGCGTCCTTATGGTGATATTGTTCATGATTCTCATGCTGAAGTTATAGCTAGAAGAGCTTTGATCAGGTTCTTCTATACACAGATTCAATATCTTTCTGAAACTAGTAGCAAGTCTGCACCTAGCAATGGATGCAAACGGTTCAAAGTTGACGATGACAATTTAGCATTCGAGTTGGACCGAGGATGTCTTGACAAACGGAAATATACCTTGAAAAGTGGTTGGAAATTACATATGTACATATCACAGTTACCATGTGGAGATGCTTCATTGAGCTCACTTGTCACTCCTTCGGAAAGTGTGCCTTTAGGAGAAAATGATTCACATTCATCATTAATTAATAGTTCAAAACAAATAGGGATGGTCCAGAGGAAGCCAGGTCGGGGTGATACAACCCTGTCAGTTAGTTGTTCTGACAAGATAGCTCGTTGGAACGTTGTTGGTGTTCAAGGAGCTTTGCTTTCGTACATTCTCCAACCTGTATATCTTTCGTCAATTACTGTTGGTCTGCCACATATCAGCCCTGAAAATTTTAATCTCGAGGATAACTTAAAAAGAGCATTGTATGATCGTATTCGACACTTGGAGAACGAGCTAACATCTCCATTTCTAGTGAACCAGCCATTATTTCTCACTGCCCCAGTACCACCGAAGGATTTTCAGCAATCTGAGAGTTCTGCTAACACTTTGACATGCGGGTATTCTATATGTTGGAATGAATGTGGCTTACATGAAGTCACCCTTGGAACTACCGGAAGAAAGCAAGGAACATCTGCAAAAGGGGCACTCTATCCATCATCGGAGTCGTCTTTATGCAAAAAGAGGCTGTTGGAGGTTTTCTTGTCATTGAGAAAAGAGTGCTTGGCAAGGTCCTTGGACAACGAGGTTACTTACCGAGAACTTAAGGATGGAGCTGAAGAATATCATTTAGCTTCTAAAATTTTTAAAGGGTTCGTGAAACCCTTGGACTGCGAGAAATTTTCCATTTCAAAATAA 1194 0.4045 MASSEENSLGKRVSEKVISSYNSLSKKGKPQGREVTVLAAFLLSSPSNELKVIALGTGTKCIGRSLLRPYGDIVHDSHAEVIARRALIRFFYTQIQYLSETSSKSAPSNGCKRFKVDDDNLAFELDRGCLDKRKYTLKSGWKLHMYISQLPCGDASLSSLVTPSESVPLGENDSHSSLINSSKQIGMVQRKPGRGDTTLSVSCSDKIARWNVVGVQGALLSYILQPVYLSSITVGLPHISPENFNLEDNLKRALYDRIRHLENELTSPFLVNQPLFLTAPVPPKDFQQSESSANTLTCGYSICWNECGLHEVTLGTTGRKQGTSAKGALYPSSESSLCKKRLLEVFLSLRKECLARSLDNEVTYRELKDGAEEYHLASKIFKGFVKPLDCEKFSISK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01203 397 PANTHER EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN 4 388 - -
Trre15g01203 397 ProSiteProfiles Adenosine to inosine editase domain profile. 54 386 IPR002466 GO:0003723|GO:0004000|GO:0006396
Trre15g01203 397 SMART adara_8 8 394 IPR002466 GO:0003723|GO:0004000|GO:0006396
Trre15g01203 397 Pfam Adenosine-deaminase (editase) domain 54 383 IPR002466 GO:0003723|GO:0004000|GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01203 Trre-Chr15 9376587 9380409 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01203 K15440 - gmx:100789591 628.632