Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01174 ATGAAAACAGGAATTCTTGAAGTACTTCTTGTTAATGCTAAAGGCATTAGACATACAAACATTGTTGGAACACCTTCCTACTATGTGATTATTGAGTGTGGGTCTCAATCTCAAAGAAGCAAAATTTCATCAGACAAAAATGAGAAACCTTGTTGGAATGAGAAATTCGAATTTGATTTCTCGTCTTTTGATTGCAAGATGAAGGCAACCTATCTTAAATGTAAAATCATGAATACAAAATTCTTCACAAATGGTGGATTTGTTGGGGAAGCCAAGGTTTACATAGATGGAATAATCACTGAAGGAACTAAACATGGATTTATAGACATAAAACCAGCTGCATATAATGTTGTACTTGAAGATGACACATACAAAGGACAACTAAAGATTGGATTTAAATTCATCGCAAATAAAGAAAAGTATGTGATGAGGAATCAAGAATCCATTGCTGTGGAGAAACAACCAAAACGTTCAATTTGGGGATCCATTTGGAGAACATCATGGTGGAAATTCTTATTTTTCTATAATAAAAAGATTAATTCCAAAGATAAACAAAAGAGGAATTAG 567 0.3263 MKTGILEVLLVNAKGIRHTNIVGTPSYYVIIECGSQSQRSKISSDKNEKPCWNEKFEFDFSSFDCKMKATYLKCKIMNTKFFTNGGFVGEAKVYIDGIITEGTKHGFIDIKPAAYNVVLEDDTYKGQLKIGFKFIANKEKYVMRNQESIAVEKQPKRSIWGSIWRTSWWKFLFFYNKKINSKDKQKRN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01174 188 Gene3D C2 domain 2 136 IPR035892 -
Trre15g01174 188 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Trre15g01174 188 PANTHER C2 DOMAIN-CONTAINING 1 181 - -
Trre15g01174 188 Pfam C2 domain 4 102 IPR000008 -
Trre15g01174 188 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 135 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01174 Trre-Chr15 9159168 9160832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01174 - - gmx:100782233 277.715