LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre15g01169	ATGGGGTCTAATTCATTGAAGGATTATCTAAAAAAATATGTGAGTAATCCTGAAGAAGACAAGAAAAAGAAGAAAAAGAAGAGGAAAACTCTACCACAACCATCTGGATTGTTAGTTGTTGATGAAGATCCAGCCTGGCAGAAACCTGTAGACCTCGGAGAAGAAGAAAACGTTGAGAACTCATCCGATGAGGAGAAGCCGGTAGTTGATGAAGATATTGAAGTAAAGCGTATGAAGAGGCTTGAGCAGCTGAAGGCCAGGCGTTCTTATCATGATATATCCGAGGATGGAAGTGGTTGGATTCCACTTTCTTCTAAGTCTGAGAATCCTAGTGACTCAAATGATATGTCTCCACCTCGTAAGCAGAGGGTTCGAAATGACACTCCTTCACCAGAACCTGAATTAAATCATTCCACTTCTAACAAAACGGGTGCTGATTTATCTCCTTCGCGCCGGAAGTTGAAACGCAAAGACACTCCATCACCTGAACGTGACTCACAACTTGCACATTCGGAGGGATTGAATTCTGATTTATCTCCCCCTCGTAAACACAGAGATCAGATAGCTCGTGAACCAAGGTTGTCTAAATCAAAATTTGAAGATAGTGATATATCACCTCCTCGACGGCAACATACGGAAGATCTTTCTCCACCTAGACGAGGTCGTCATGATTCTCCCTCTCAAGATACCTTACATGGAACTGTGTCATCTGACCTTTCACCCCCGAGGAAACGCCAGCATAGTGTTGCAAGATCGAGTTTATCTGATGTTTCTCGTCGTTCGCATCCATCTTTCGATCACGACCTATCTCCACCAAGGAAGAAATCGAAGGAGCTATCCATTCCAGCATCTGTTAATGAAAGAAAGACGGGTTTGATTTCTGGTAAGGATATCAGAGAAGAGATTGACAAAAAGAAGAAGGAGGACTTGCTGAGACTTAAACAGATGGACCCTGTCATTAGTGGGCGTGGCGCTGAACCTGTATTTCGTGATAACAAAGGAGCACGCATTACCAAAGAGGAATACGTAAAGTCAAAACAGAAAGTAGAAGAAAAGCCCAAGGAGATTCAAATAGAATGGGGCAAGGGCTTGGCTCAAAAGAGAGAAGCTGAGGCTAAGCAAAAGGAACTAGAAGTTCAGAAGGAAAAACCTTTTGCTCGAACCAGAGATGATCCTGAACTTGACAAGTCACTGAAGGAGAGGATAAGATGGGGGGATCCTATGGCACACCTGGTAAAGAAAAAATATCCAGAGCCTGTTCTGCCGAACCTGGGGGATAGTGATAAAATGAGGGAATCTGGTTTTGTTGTTCCTCAGGATATTCCAAGTCATAGCTGGTTGAAGAGAGGTTTAGAGGCCGCTCCAAATCGGTATGGGATACGGCCAGGACGACACTGGGATGGTGTTGATCGTAGTAACGGGTTCGAGAAGGCATTGTTTAAGAGGATGAATGAGAGACAAGCTACAGACAAAGAGGCTTATCTTTGGTCTGTCTCTGATATGTGA	1506	0.4389	MGSNSLKDYLKKYVSNPEEDKKKKKKKRKTLPQPSGLLVVDEDPAWQKPVDLGEEENVENSSDEEKPVVDEDIEVKRMKRLEQLKARRSYHDISEDGSGWIPLSSKSENPSDSNDMSPPRKQRVRNDTPSPEPELNHSTSNKTGADLSPSRRKLKRKDTPSPERDSQLAHSEGLNSDLSPPRKHRDQIAREPRLSKSKFEDSDISPPRRQHTEDLSPPRRGRHDSPSQDTLHGTVSSDLSPPRKRQHSVARSSLSDVSRRSHPSFDHDLSPPRKKSKELSIPASVNERKTGLISGKDIREEIDKKKKEDLLRLKQMDPVISGRGAEPVFRDNKGARITKEEYVKSKQKVEEKPKEIQIEWGKGLAQKREAEAKQKELEVQKEKPFARTRDDPELDKSLKERIRWGDPMAHLVKKKYPEPVLPNLGDSDKMRESGFVVPQDIPSHSWLKRGLEAAPNRYGIRPGRHWDGVDRSNGFEKALFKRMNERQATDKEAYLWSVSDM	501

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre15g01169	501	MobiDBLite	consensus disorder prediction	292	308	-	-
	Trre15g01169	501	MobiDBLite	consensus disorder prediction	228	259	-	-
	Trre15g01169	501	MobiDBLite	consensus disorder prediction	260	275	-	-
	Trre15g01169	501	MobiDBLite	consensus disorder prediction	1	308	-	-
	Trre15g01169	501	MobiDBLite	consensus disorder prediction	69	94	-	-
	Trre15g01169	501	MobiDBLite	consensus disorder prediction	100	117	-	-
	Trre15g01169	501	Pfam	Pre-mRNA-splicing factor of RES complex	327	484	IPR018609	-
	Trre15g01169	501	MobiDBLite	consensus disorder prediction	177	227	-	-
	Trre15g01169	501	PANTHER	BUD13 HOMOLOG	3	501	-	-
	Trre15g01169	501	MobiDBLite	consensus disorder prediction	148	165	-	-
	Trre15g01169	501	MobiDBLite	consensus disorder prediction	131	147	-	-
	Trre15g01169	501	MobiDBLite	consensus disorder prediction	371	394	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre15g01169	Trre-Chr15	9121615	9125738	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre15g01169	K13106		-	gmx:100783213	626.706