Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01164 ATGAAGATCAACAAAGCTGCCGATCTCTCTTCAATCTCCGTCTTCCCTCCTCCTCACATTTATCCAAGGAAGACGAACAATGTATCGAACGGATTGCAAGCGTCGCAGCAACATCGATCACAACCGTCTCAACAGTCGTTTTCTCAGGGACTTTCATCTCAGCAAGGAATTTTGTCTCATTTCTCTCAAAGCTCTCTCGATGAAGCTGTCACAGCAAACGATCAGAGATTCGGTTCTCAAGAACATGAGAACTCTTCAAGGAGATTTTCTAGTTTGCCCCGACTTACTTACTCAAAGGACGAGAGTCAACCACACAACTCAAGATCTTCATCCAATATGTTGGTCAAATGGAACTCTGCAGATAACAAAAATCAGTTAAGTGAAGGACTCGAAAACCGAATTGGCATAATGGAAACCTCATTGAACAGATTTGCAATGATCATGGATTCTGTTCAAAGTGACGTAATGCAAGTAAACAAAGGAACGAAGGAACTTAATTTGGAGATGGAGCACATAAGACAGAAGTTGATTGCTCAGGATAACTCAATTCAGTTAATGATGAAAGGACAGGAAGAAATTAAAGCAAGCATTAATGAGAGCTTGAAATCTTTATCTGAACAAATGAGCCACATTTCAAACATAGAGAAGTTACAGGAAGTATATATGTTGGTTTCAGCCATGCCTCAGCTAATTGAAGGCTCTCTGCGAAATTTGCAAAATGATCTCCAGAACACCACCAAGGAAATGCATGAAATCTCTTGCAGTTTAAAACATACTAATCACAAGGATCTGGCACAGCCTATAATTCTACCTCCAAAGTGTGTTAGCAAACCAGTTATCACACCAAAAATACATCAGCGTCCTGCTAATGAAGCGAAGATGAACACTCCAGCTATTGTAGCTTCAAAAGTAGACACGGGAGGCTGGATGCCAGTAAAAAGAGAGAGAGTCATGTTTACAGATAGAATATCTGAGAAAGTGCAAAAGAAAAATCAACCAAAAGCAGAGAAGGGTATAAGGGGAGGAAGAAACTGTGCAATTGTCATTGAATCTGACGAGGAGACTGATCAAAGTTTTTCATGCTTTGAAGTAAATGCAGTAGCAGCAAAGGGGGAAGGGAACAACAGATCACAAATTACAAATGAGGCAAGTCAAGTCAGCCAAATGGAGGGAGCTGAGTTGGTTACGACAGATACACAGGTAGCAGTGAGGAGGAGTGCAAGGAAGAGACTCCCTAACCGAATGATGGATAGTTTTATGTGCAAAGGGTATAAGAAACAAAATCTGAGAGTGAAGGGTATGTTTGATCTGTAA 1314 0.4072 MKINKAADLSSISVFPPPHIYPRKTNNVSNGLQASQQHRSQPSQQSFSQGLSSQQGILSHFSQSSLDEAVTANDQRFGSQEHENSSRRFSSLPRLTYSKDESQPHNSRSSSNMLVKWNSADNKNQLSEGLENRIGIMETSLNRFAMIMDSVQSDVMQVNKGTKELNLEMEHIRQKLIAQDNSIQLMMKGQEEIKASINESLKSLSEQMSHISNIEKLQEVYMLVSAMPQLIEGSLRNLQNDLQNTTKEMHEISCSLKHTNHKDLAQPIILPPKCVSKPVITPKIHQRPANEAKMNTPAIVASKVDTGGWMPVKRERVMFTDRISEKVQKKNQPKAEKGIRGGRNCAIVIESDEETDQSFSCFEVNAVAAKGEGNNRSQITNEASQVSQMEGAELVTTDTQVAVRRSARKRLPNRMMDSFMCKGYKKQNLRVKGMFDL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01164 437 MobiDBLite consensus disorder prediction 23 54 - -
Trre15g01164 437 PANTHER RECOMBINATION INITIATION DEFECTS 3-RELATED 281 414 IPR034546 GO:0048236|GO:0070192
Trre15g01164 437 MobiDBLite consensus disorder prediction 73 112 - -
Trre15g01164 437 MobiDBLite consensus disorder prediction 1 54 - -
Trre15g01164 437 Coils Coil 235 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01164 Trre-Chr15 9052329 9056738 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01164 - - mtr:11444577 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01164 15 9052329 9056738 Trre15g01164 15 9052329 9056738 ECH