Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01156 ATGGCACCGCCGAAACTGAAACGTAACTTCCCTCCGATAACCGAATTCAACCGAAATTCTTCGCCGTGTGAATCTGTCGCCGCCGATCTCGACGGAACTCTTCTCATTTCTCGAAGCTCTTTTCCTTACTTCATGCTTGTTGCTGTTGAAGCTGGAAGTCTCTTCCGTGGCTTCATTCTTCTTCTCTCCCTTCCTTTTGTTATCATCGCTTATCTTTTTATTTCTGAAGCTCTTGGTATTCAGATTTTGATTTTCATCTCATTCGCCGGTCTCAAAATTCGTGATATCGAACTCGCTTCACGCGCTGTTCTTCCACGATTTTATGCTGCGGATGTGAGGAGAGAGAGTTTTGAAGTGTTTGATCGGTGTAAGAGGAAGGTAGTGGTGACCGCGAATCCGACGGTGATGGTGGATGCATTTGTGAAGGATTATCTCGGCGGAGATAAGGTTTTGGGAACGGAAATCGAGGTGAATCCTAAGACGAAGAAGGCGACTGGATTTGTGAAGAAACCTGGTGTGCTTGTTGGAGATTTGAAGCGTTTGGCGGTTGAGAAAGAGTTTGGTGATGAATCGCCTGATATTGGACTTGGAGATCGCAAAACTGATCATGATTTCATGTCAATTTGCAAGGAAGGGTACATGGTACCTCCAAACAAATTAGCAAAACCAGTCCCACAAGAGCGTCTCAAGAGCCGAATCATCTTCCATGACGGCCGCTTCGTACAGCGTCCAGACCCACTAAATGCCATCATCACCTTTGCCTGGATCCCCTTTGGCTTCATCCTCTCCATCATCAGAGTCTACTTCAACCTCCCTCTTCCTGAACGCATAGTTCGTTACACCTACGAAATACTTGGCATCAAACTGGTAATCCGCGGCAACCGTCCTGCACCACCTTCGCCAGGTACCCCCGGAAACCTCTACGTCTGCAACCACCGTAGCGCCCTCGACCCCATCGTCATCTCCATTGCCCTCGGCCGCAAAGTCTACTGTGTCACTTACAGTGTCAGCAAACTCTCCCGCTTCCTCTCACCAATCCCTGCCATTGCCCTCACCCGTGACCGCGCTGCTGATGCAGCCCGGATCACTGAGATTCTCCAAAAGGGTGACCTCGTTGTGTGCCCAGAAGGCACCACCTGCCGTGAGCCTTTCTTGCTACGGTTCAGTGCTCTATTTGCTGAGCTGAGTGATAGGATTGTCCCCGTAGCAGTTGATTGCAAGCAGAACATGTTCTATGGGACCACTGTTCGTGGAGTCAAATTCTGGGACCCTTATTTCTTTTTCATGAATCCTAGGCCTGTTTATGAGATTAATTTCCTTGACCGGTTACCTGAAGAAATGTCGGTTAAAGCTGGTGGGAAATCTTCGATTGAGGTTGCTAATCATGTGCAGAAAGTTTTGGGTGATGTGCTTGGATTTGAGTGTACCAGTTTGACAAGGAAAGATAAGTATTTGTTGCTGGGAGGAAATGATGGGAAGGTGGAGTCAATGTATGGTGTCAAAAAGTGA 1509 0.4798 MAPPKLKRNFPPITEFNRNSSPCESVAADLDGTLLISRSSFPYFMLVAVEAGSLFRGFILLLSLPFVIIAYLFISEALGIQILIFISFAGLKIRDIELASRAVLPRFYAADVRRESFEVFDRCKRKVVVTANPTVMVDAFVKDYLGGDKVLGTEIEVNPKTKKATGFVKKPGVLVGDLKRLAVEKEFGDESPDIGLGDRKTDHDFMSICKEGYMVPPNKLAKPVPQERLKSRIIFHDGRFVQRPDPLNAIITFAWIPFGFILSIIRVYFNLPLPERIVRYTYEILGIKLVIRGNRPAPPSPGTPGNLYVCNHRSALDPIVISIALGRKVYCVTYSVSKLSRFLSPIPAIALTRDRAADAARITEILQKGDLVVCPEGTTCREPFLLRFSALFAELSDRIVPVAVDCKQNMFYGTTVRGVKFWDPYFFFMNPRPVYEINFLDRLPEEMSVKAGGKSSIEVANHVQKVLGDVLGFECTSLTRKDKYLLLGGNDGKVESMYGVKK 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01156 502 FunFam Glycerol-3-phosphate 2-O-acyltransferase 6 108 227 - -
Trre15g01156 502 SMART plsc_2 306 407 IPR002123 GO:0016746
Trre15g01156 502 Gene3D - 106 230 IPR023214 -
Trre15g01156 502 Pfam Acyltransferase 305 395 IPR002123 GO:0016746
Trre15g01156 502 PANTHER ANCIENT UBIQUITOUS PROTEIN 24 496 - -
Trre15g01156 502 CDD LPLAT 282 436 - -
Trre15g01156 502 Pfam haloacid dehalogenase-like hydrolase 27 206 - -
Trre15g01156 502 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 220 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01156 Trre-Chr15 8995258 8999093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01156 1 502 Acyl Lipid Metabolism Gene Families AT4G00400 79.880 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01156 K13508 - gmx:100794137 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01156 15 8995258 8999093 Trre15g01156 15 8995258 8999093 ECH