Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01136 ATGCCTACAACAACTTACAAACAAAAATGGATTCCTCAATTCAATGCAAAGACTAATTCTACTTATTTTGGTGCACAAGGTTCAAAGTATCTTATGTATGCTTCTCCAGTCTTGTTAATAGCTATTTTGGGATGTGTCTATCTTCACATAGCCAAAAAAGCAAATGAGTGTGACATAGACATTGACAATGGAAAGAACCATGAAACAACCATATGGAATCGTCCAATGCTTGTAAAAGGTCCACTTGGAATTGTTTCTAGCATAGAGATTGCATTCTTGCTTATGTTCATTGGACTTCTTGTTTGGTCCTTAGGAACTTGGTTACACAATGACTTTGCAAAGATCACATCAGAACCACCAGAGGATGGCCAGAAAGTGTGGCAAGAGAAATTGGAAATGTTGGCACTAAGGTTAGGGCTTGTTGGGAACATATGTTTGACATTGTTATTTTTTCCTGTGACTCGTGGTTCATCCGTGCTACCATTGTTTGGACTCACTTCTGAAAGTTCCATAAAGTATCATATTTGGGTTGGACACGTGCTCATGACAATTTTTACTTCTCATGGAATTTGTTACATCATCTATTGGGCATCTACTAATCAAATTTCTGAGATGGTAAAATGGGACAAAGTTGGAATATCAAATGTAGCTGGAGAGATATCTTTGCTTGCTGGTTTGTTCCTATGGGTTGCAACCATTCCTAAAATTAGGAGAAAATTCTTTGAGCTTTTTTTCTACACTCATAATCTCTACATCATTTTCATGATCTTCTTTATCTTTCATGTTGGCATTTCCTATGCCTTCATCATGCTCCCCGGTTTCTACCTCTTTGTGGTTGACCGTTACCTACGGTTTTTGCAATCTAGACGCGAAGTTCGTTTGGTTTCATCTCGTGTTTTGCCGTGTGAAACCATAGAACTCAACTTCTCCAAAGGACATGGGTTGAGTTATAATCCGACAAGTGTGATGTTCATAAATGTACCAAGCATATCAAAATTACAATGGCATCCATTTACCATTACTTCTAATAGTAAATTGGAGCAAGATAAGCTAAGTGTTGTCATCAAAAGTGAAGGACCTTGGACACAAAAGCTCTATCAGATACTTTCAAATCCTTCACCAATCGATCGCCTAGCTATATCCGTCGAAGGTCCTTATGGACCTGCTTCAACCAATTACCTAAGGCATGACACACTTGTGATGGTGAGCGGCGGAAGTGGTATTACACCTTTTATCTCAATCATTAGAGAGATAATATATCTTAGCACCACATTCAAATGCAAAACACCAAACATTGTCCTAATTTGTTCATTCAAGAGTACTTCATATCTATCAATGCTAGATTTGATCCTACCAATTTCTGGCACACCATCTGAAATTTCTGATCTTCGACTACAAATTGAGGCATACATCACAAGAGACAAAGAGTTTAAATCAGATATTCCAATTCATCCTCAAACTATATGGTTTAAGCCAAATCCAACAGATGCACCAATACATGCTATGTTAGGTCCAAACACTTGGCTATGGCTTGGTGCTATAATCTCATCGTCTTTCATCATCTTCCTTATCATAATCGGGATCATTACTCGTTACTACATTTTTCCTATCGATCATAACACGAATAAAATCTTCGCGTATCCATTAAGATCGTTTCTTTACATGCTAGTAATATGTGTGTCAATAGTTGTTTCTGCTAGTGTAGCGGTCCTTTTGAACAAGAAACAAAATGGTAAAGAAGCGAAACAGATTCAGAATTTGGAAGGGTCATCACCAACAGTGTCACCAAATTCAATGATTTACAATGAAGATAGAGAATTGGAAAGTCTTCCATCTCAGTCTCTTGTTGAAGCTACCAATGTGCATTATGGTTCAAGACCTGACTTGAGAAGACTTTTATTTGAAATCAAAGGGTCAAGTGTGGGAGTTCTTGTTTCAGGACCTAAAAATATGAGGCAGGAGGTTGCAGCCATTTGCTCATCTGGTTTAGCCGAAAATCTGCATTTTGAGTCTATAAGTTTTACCTGGTGA 2031 0.3781 MPTTTYKQKWIPQFNAKTNSTYFGAQGSKYLMYASPVLLIAILGCVYLHIAKKANECDIDIDNGKNHETTIWNRPMLVKGPLGIVSSIEIAFLLMFIGLLVWSLGTWLHNDFAKITSEPPEDGQKVWQEKLEMLALRLGLVGNICLTLLFFPVTRGSSVLPLFGLTSESSIKYHIWVGHVLMTIFTSHGICYIIYWASTNQISEMVKWDKVGISNVAGEISLLAGLFLWVATIPKIRRKFFELFFYTHNLYIIFMIFFIFHVGISYAFIMLPGFYLFVVDRYLRFLQSRREVRLVSSRVLPCETIELNFSKGHGLSYNPTSVMFINVPSISKLQWHPFTITSNSKLEQDKLSVVIKSEGPWTQKLYQILSNPSPIDRLAISVEGPYGPASTNYLRHDTLVMVSGGSGITPFISIIREIIYLSTTFKCKTPNIVLICSFKSTSYLSMLDLILPISGTPSEISDLRLQIEAYITRDKEFKSDIPIHPQTIWFKPNPTDAPIHAMLGPNTWLWLGAIISSSFIIFLIIIGIITRYYIFPIDHNTNKIFAYPLRSFLYMLVICVSIVVSASVAVLLNKKQNGKEAKQIQNLEGSSPTVSPNSMIYNEDRELESLPSQSLVEATNVHYGSRPDLRRLLFEIKGSSVGVLVSGPKNMRQEVAAICSSGLAENLHFESISFTW 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01136 676 Gene3D - 380 499 IPR039261 -
Trre15g01136 676 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 287 392 IPR017927 GO:0016491
Trre15g01136 676 Pfam FAD-binding domain 292 390 IPR013112 GO:0016491
Trre15g01136 676 FunFam Ferric reduction oxidase 3 385 502 - -
Trre15g01136 676 SFLD Ferric reductase subgroup (FRE) 15 676 - -
Trre15g01136 676 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 380 452 IPR039261 -
Trre15g01136 676 Pfam Ferric reductase like transmembrane component 138 258 IPR013130 -
Trre15g01136 676 SFLD Ferric Reductase Domain 1 676 - -
Trre15g01136 676 Pfam Ferric reductase NAD binding domain 396 660 IPR013121 GO:0016491
Trre15g01136 676 CDD NOX_Duox_like_FAD_NADP 298 473 - -
Trre15g01136 676 PANTHER NADPH OXIDASE 6 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01136 Trre-Chr15 8797700 8801332 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01136 1 676 Miscellaneous Gene Families AT1G01580 60.292 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01136 K00521 - gmx:100790114 1016.14