Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01134 ATGCGTGGCATTGTTTGGTTAGAACAAAAAGTGAAAATTGATTCTAATGATGAAAATCTCTTACCCCTTTTGAAGATCTCTGAAGATACAACAAATTTCAAGTACAAAAACCCAAAGGGTCATAGGTCAGCTATAAGGATATCAAGGATAGTGTCAGAAACAGTGAGACTTGGAATGGAAAATGTGAGATGGTTTGTTATGGGTGATGATGATACATTTTTTGTTGCTGAAAATTTGATTAATGTTTTGAAGAAATATGATCATAATCAATTTTATTATATTGGTAGTAGTTCAGAAAGTCATTTGCAGAATATTTATTTTTCTTATAATATGGCTTATGGTGGTGGTGGATTTGCTATAAGTTATCCTTTAGCTGTTGCTTTGGAGAAAATGCAAGATAGGTGTATTCAAAGATATCCTGGATTGTATGGTTCTGATGATAGGATTCAAGCTTGTATGGCTGAGCTTGGTGTTCCACTTACTAAGGAAAAAGGGTTTCATCAGTTTGATGTGTATGGGAATCTATTTGGGCTTCTAGCAGCCCATCCCGTTACGCCGCTGGTATCCCTCCACCACTTGGACGTCGTGGAGCCCATATTTCCGAATGTTAGTCGGGTCCAAGCCCTAAAGCGGCTTACATTGCCAATGAATTTGGACCCGGCTGGACTCATCCAACAATCCATTTGCTATGACAAAACAAGGACTTGGACCATATCTGTGTCTTGGGGCTATGCGGTTCAAATATTTCGTGGCACTTTCTCGGCCCGGGAGATGGAGATGCCGGCTAGGACTTTCCTAAATTGGTACAAGCGAGCTGATTACACTGCATATCCGTTCAACACACGCCCCGTCAGCCGAAATGTTTGTCAAAATCCATTTATTTATTACTTGACTAATGTGATATATAATGAGGATACAAACGAGACTGCAAGTCGATATGTTCGGGTTCAATCAAATCCAGATTGCAAGTGGAAAATGGAGGATCCGTCTCAAATCAAAGTGGTACTGGTTTATAAAAAACCCAACCCGCATTTGTGGGAGAAGTCTCCAAGAAGAAACTGTTGCAAGGTTCGAAATACAAAGAGGAAAGGAACCATGATGATTGATGTGGGAGAATGCAGAGAAGATGAAGTTGTTGAATTGTAG 1146 0.3988 MRGIVWLEQKVKIDSNDENLLPLLKISEDTTNFKYKNPKGHRSAIRISRIVSETVRLGMENVRWFVMGDDDTFFVAENLINVLKKYDHNQFYYIGSSSESHLQNIYFSYNMAYGGGGFAISYPLAVALEKMQDRCIQRYPGLYGSDDRIQACMAELGVPLTKEKGFHQFDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNVSRVQALKRLTLPMNLDPAGLIQQSICYDKTRTWTISVSWGYAVQIFRGTFSAREMEMPARTFLNWYKRADYTAYPFNTRPVSRNVCQNPFIYYLTNVIYNEDTNETASRYVRVQSNPDCKWKMEDPSQIKVVLVYKKPNPHLWEKSPRRNCCKVRNTKRKGTMMIDVGECREDEVVEL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01134 381 FunFam Fringe-related protein-like 1 217 - -
Trre15g01134 381 Pfam Protein of unknown function, DUF604 103 355 IPR006740 -
Trre15g01134 381 Gene3D - 7 213 - -
Trre15g01134 381 PANTHER FRINGE-RELATED 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01134 Trre-Chr15 8784090 8788188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01134 1 381 Glycosyltransferase AT4G23490 71.948 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01134 - - gmx:100789583 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01134 15 8784090 8788188 Trre15g01134 15 8784090 8788188 ECH