Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01100 ATGGCAGAAACTGATCAAGCAAACCCTCTAGCCCCAGTTAGAGTCCACCCAAGAAGTGATGATGAAGAAAAAGCTCTCAACACAAAGAACCGTAGAAGAAAATTTAAGTTATGTGGATGTGTAACAGCAATTTTACTACTACTTTTAGTCATAGTTATTGTTATCTTAGTATTCACGGTTTTTAAGGTTAAAGATCCAAAAGTAACAACAAATGAGATCCAACTCACAAACTTTGATGTCAACGTTGGTAACCTTCTAGCAGGTCAAATTAAGATCAACATGACAATGGTTGTAAACATGTCTATTAAGAATTCTAATAGTGCATCGTTTAGACTTGGAAATAGCACAACAACGGTATACTATCGGGGTATATCGGTTGCGGATGCACAAATACCACCCGGAATTGTGATCAAGGCAAGGAAGACATCAGGATTGAATGTTACGGTAGATGTTATGGCTGACCGCCTTGTTTCTAGTCCGAATTTGTTGGGAGATGTGGCTAACGGCGAGATGATCATGAGCACTTACTCCGTAATTCCGGGGAGAGTGAAGATGTTGTTTATTAAAAAACATGTTGAGGTGAAAATGAATTGTACTATGACAATTAACATTTCAAAGAGAGGAATTGAAGACTTGAATTGTAAACATAAGGTGAAACTTTAG 663 0.3756 MAETDQANPLAPVRVHPRSDDEEKALNTKNRRRKFKLCGCVTAILLLLLVIVIVILVFTVFKVKDPKVTTNEIQLTNFDVNVGNLLAGQIKINMTMVVNMSIKNSNSASFRLGNSTTTVYYRGISVADAQIPPGIVIKARKTSGLNVTVDVMADRLVSSPNLLGDVANGEMIMSTYSVIPGRVKMLFIKKHVEVKMNCTMTINISKRGIEDLNCKHKVKL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01100 220 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 31 215 - -
Trre15g01100 220 SUPERFAMILY LEA14-like 47 159 - -
Trre15g01100 220 MobiDBLite consensus disorder prediction 1 25 - -
Trre15g01100 220 Gene3D - 52 214 - -
Trre15g01100 220 Pfam Late embryogenesis abundant protein 100 199 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01100 Trre-Chr15 8540686 8541348 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01100 - - tpra:123884615 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01100 15 8540686 8541348 Trre15g01100 15 8540686 8541348 ECH