Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01098 ATGACAAAACAAAACGTTAATACAAAGTTAAGAAGATGGAGAGGTGTTTATATTTTCATTTTTGTAGCTGGATCCATTGCTCTTCTTCTTTCTGGTGCATCCATGTCGAAATTCTTCTCTTTGAAATCATTTCTTGATGTTGATTCTTTTTACACTCATCTAACTCCTTCTGAGGACACAAATAAGAATAATCAAAATGAAGTGTTAGCAACTGTGCAAATTGTTATTGCGAAAATTCAGGAAGAACTTAAAAAACTTAGGGAAATACATCAAAATCCATCATCATCGTCGTTGTCCTCGTCACAATATGTGTTGAAACAAGGTGCTTTCCTTGCCGACATATTAGGACTACTCGAATCTCTGCATAGCGAAGATCAAAACAGTGGTTTTGTCGTTCATCCTTTGATGAAAGAAAAGAAGCGATCGGACGAACCTGCTAATTACTTTTTGAGAGAAGAGATTCGAAAATATGTCAGAATTAGGCCTAATAGATTAGGAAAACAAAATTTCATGGGGGCGAACGCGACATTCACTAGCATAGGACATGCTTGTTTTTCCATGAAGGAAGATTTAGAAGAGTACATGGATTATGATATTGGTGAAATATGTAATGATGATTGGAAACTAGCTCAAAAGCTTATGGTTCATGGATGTGATCCTTTACCAAGGAGAAGGTGCTTTTCAAGAGCACCTAAGCTATACCATAAACCATTCCCTATCAAAGAATCCATGTGGAAATTACCTGATGATAGAAATGTTAGATGGAGTCAATATAGGTGCAAGAACTTTACTTGTCTCGCAAGCAACAACAACACTCGAAAGGGATTCTTCAAGTGTGCAGATTGTTTCAATCTTACCGATCATGAGATGCCAAGATGGATAAGATTGAATGATGATTCAATTTCAAACCAAACAAGTGAAGCTGACTTTTTCATAGATGATGTTCTTGGAATTAAGTTAGGTGAGATTAGAATTGGATTGGATTTTAGTGTTGGAACTGGAACTTTTGCTGCTAGAATGAAAGAATTTAATGTGACAATAGTTTCAGCAACTATTAATCTTGGTGCACCTTTTAGTGAAATGATAGCTCTTAGAGGACTTGTTCCTCTTTATTTGACTATAAATCAAAGGCTTCCATTTTTTGATAATACACTTGATTTGATTCACACAACAAGGTTTCTTGATGGTTGGATTGACTTTGTACTTTTGGATTTTGTTTTGTATGATTGGGATAGAGTTTTGAGGCCAGGAGGGTTGCTTTGGATTGATAGCTTTTTTTGTTTGAAGGAAGATTTGTATGTTTATTTGGAGGCTTTCAAAATGTTGAGATATAAAAAGCACAAATGGATTGTTGTTCCAAAGATTGATAAGGATGATAAAGAAGTGTTCTTTTCTGCTGTTTTAGAGAAACCTTCTAGGCCATTTAGGTAA 1431 0.3522 MTKQNVNTKLRRWRGVYIFIFVAGSIALLLSGASMSKFFSLKSFLDVDSFYTHLTPSEDTNKNNQNEVLATVQIVIAKIQEELKKLREIHQNPSSSSLSSSQYVLKQGAFLADILGLLESLHSEDQNSGFVVHPLMKEKKRSDEPANYFLREEIRKYVRIRPNRLGKQNFMGANATFTSIGHACFSMKEDLEEYMDYDIGEICNDDWKLAQKLMVHGCDPLPRRRCFSRAPKLYHKPFPIKESMWKLPDDRNVRWSQYRCKNFTCLASNNNTRKGFFKCADCFNLTDHEMPRWIRLNDDSISNQTSEADFFIDDVLGIKLGEIRIGLDFSVGTGTFAARMKEFNVTIVSATINLGAPFSEMIALRGLVPLYLTINQRLPFFDNTLDLIHTTRFLDGWIDFVLLDFVLYDWDRVLRPGGLLWIDSFFCLKEDLYVYLEAFKMLRYKKHKWIVVPKIDKDDKEVFFSAVLEKPSRPFR 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01098 476 Coils Coil 69 89 - -
Trre15g01098 476 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 36 474 - -
Trre15g01098 476 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 318 423 IPR004159 GO:0008168
Trre15g01098 476 Gene3D Vaccinia Virus protein VP39 320 462 IPR029063 -
Trre15g01098 476 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 290 446 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01098 Trre-Chr15 8527008 8528438 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01098 - - gmx:100809058 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01098 15 8527008 8528438 Trre15g01098 15 8527008 8528438 ECH