Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01092 ATGTTTCTTCCTGTTTCCGTTGTGGAAGATTCAGAAGAGTCTTTGAGAGCTGTGAAGATGAATTCTTGGAATTCTTTACCTAAAAGAGAGATGTATGTGTTGGACATTGGTGAGGATGAAGCTGTTTTTTTGTCAAGGATTTCGGACAAGTTTAAGGATTTGAATCTGTTGAACCGTAACGGGACGCAGTTTGGTTACAGGAATCCTCAGCTGGCATTGGTATTTGGAGAATTATTGGTTGATTCACAACAATTGTTAATGGTAACAGTTGCCACAGCTTTGTTAGAGATTGGCTACGGAATTCAGGTATTTTCACTTGAAGATGGACCGGGGCGTAATATGTGGAGAAATTTAAGAGTTCCCATCACTATTATTCATAATCGCAACAAGCCAGACAAAACTGTAGACTGGCTAAACTATGATGGTATAATTGTGAGCTCTCTTGAAGCAAGAAATGCCTTTTCTTGTTTTTTGCAGGAACCATTCAGGTCTGTACCACTTATATGGATTGTTCATGACAGTGCTCTTGGTTACCGTTCAAGACAATATACTGCTACTGGGCAGATTGAACTGTTGAATGATTGGAGAAGAGTTTTCAATCGTTCATCTGTTGTTGTCTTTCCAAACTATGCCTTGCCGATGATCTACTCCACATTTGATACTGGAAATTTTTATGTCATTCCTGGTTCCCCTGCTGAAGTGTTAGAAGCAGATGCATTTATGGCATTGCAGAAAGATAAATTGCGCATCAGTATGGGCTACAGTCCAGAAGATGTCATTATTGCAATTGTCGGCAGTCAATTTCTGTACAAGGGCATGTGGTTGGGGCATGCCGTTGTTTTGCAGGCTTTATCACCACTTTTGGCAGATTTTCCTTTAAGCAAAGATAATACCACCGCCCAACTACGGATCATTGTTCATAGTGGAGAGTTAACAAATAACTACACTGTGGCTCTTGAGACGATGGCACAAAGCTTGAAATATCCAAAAGGAACCATAGAGCTTATAGCTGGAGATTTGAATTCAGAGTCTGTTCTCGGCACGGCAGATGTTGTGATATATGGATCCTTGCTCGAAGAGCAGTCTTTTCCCGAGATTTTGATTAAAGCCATGTGCTTTGAGAAACCAATTATTGCTCCTGATATTTCAATGATCAGAAAATATGTCGATGACAGGGTGAACGGCTACCTTTTCCCTAAGGATAATATTAGAGTTCTTAGACAAATCATGTTAGAGGTGATCTCAAAAAGGAAAATATCACCGTTGGCTCGGAACATTGCCTCAATGGGGAGAAGAACTGCTAAGAATCTTATGGTTTCCGAAGCAATCAATGGATATGCAACTTTACTTCAGAATATTATCAAGCTTCCATCAGAGGTTGTTCCTCCTAAGGCTGTTTCAGAAATATCCCCCCATGTTAAAGAAAAGTGGCAGTGGAATTTGCTTGAAGCAGTTCCAAATTCGACGTATCAAAATAGGGTATTGAGAAGCAACACATTTTTAGATAAATACGAAGACCGTTGGAATCGTTCACGAAAAGAGAGATCGTCTACTGCTGTTGCTGACAGCGACTCATTTGTATATATGATATGGGAAGAAGAAAAACATATTCAGATGGCTATTACCAGAAAAAGGATAGAGGATGAAGAGTTGAAGGATAGAACGGAGCAGTCACACGGAACATGGGAGGAAGTATATAAGAATGCGAAGAAAGCTGATAGGTTAAAGAATGATTTGCACGAAAGGGATGATGGAGAGCTTGAGCGGACAGGACAACCACTTTGCATTTATGAACCGTACTTCGGGGAAGGATCCTGGCCTTTTCTACATCAAAGATCTCTCTATCGCGGAGTTTCCCTGTCCAGCAAAGGTAAAAGGCCAGGGAAAGATGATTTTGACGCCCCTTCTCGTCTTCCATTGCTTAACAGTATTTACTATCGAGATGTCCTTGGTGAATTTGGATCCTTCTTTGCCATTGCAAACCGGATTGATCGTTTACACAAAAATGCTTGGATTGGATTTCAGTCTTGGAGAGCAACAGCAAGGAAGGCTTCTTTGTCCAGAGCTTCTGAAAATGCATTATTAGACGCCATTCAATCCAAAAAGAATGGGGACACACTATATTTCTGGGCGCGGATGGATACAGATCCGCGAAACCCTTCACAGACAGATTTTTGGTCATTTTGCGATGGCATTAATGCAGGAGGTTGCAAACCTGCTTTCTCAGAAGCAATGAGGAGAATGTATGGATTAAAGGATGATGTGGATGCTTTGCCGCCCATGCCCGTAGACGGTGACACTTGGTCTGTCATGTCTAGTTGGGCTCTACCCACAAGATCCTTTTTAGAGTTTGTGATGTTCTCCAGAATGTTTGTCGATGCATTGGATGCGCAAATGTACGAGGAGCACCATTTGACTGGACACTGTCCTTTGAGTTTGTCAAAGGATAAGCATTGTTATTCAAGGGTTCTTGAGCTTCTTGTAAACGTGTGGGCCTACCACAGCGCAAGGAGGATGGTATTCGTAAACCCCGAGACCGGACTAATGCAGGAACAACACAATTTCAAGAACCGTAGAGGACAAATGCGGATCAAATTGTTCTCGTACAACACACTCAAGAACATGGACGAGGACTTAGCAGAGTTATCGGATTCTGAGGATCCTAATAGACACTGGTTGTGGCCATCAACCGGTGAAGTTTTTTGGCAAGGTTTATATGAGAGGGAGAGAAGTTTAAGGCACAAGGAGAAAGAAAAGAGGAAGCAAAAGAGTTTAGAAAAATTGAATAGAATGCGGAAGCGACATCGACAACAAGTTATCGGAAAATATGTTAAGCCTCCACCAGATATGGAAGAAAGTTCTAATTCATCTTTGCTTGCAGTATAA 2886 0.4155 MFLPVSVVEDSEESLRAVKMNSWNSLPKREMYVLDIGEDEAVFLSRISDKFKDLNLLNRNGTQFGYRNPQLALVFGELLVDSQQLLMVTVATALLEIGYGIQVFSLEDGPGRNMWRNLRVPITIIHNRNKPDKTVDWLNYDGIIVSSLEARNAFSCFLQEPFRSVPLIWIVHDSALGYRSRQYTATGQIELLNDWRRVFNRSSVVVFPNYALPMIYSTFDTGNFYVIPGSPAEVLEADAFMALQKDKLRISMGYSPEDVIIAIVGSQFLYKGMWLGHAVVLQALSPLLADFPLSKDNTTAQLRIIVHSGELTNNYTVALETMAQSLKYPKGTIELIAGDLNSESVLGTADVVIYGSLLEEQSFPEILIKAMCFEKPIIAPDISMIRKYVDDRVNGYLFPKDNIRVLRQIMLEVISKRKISPLARNIASMGRRTAKNLMVSEAINGYATLLQNIIKLPSEVVPPKAVSEISPHVKEKWQWNLLEAVPNSTYQNRVLRSNTFLDKYEDRWNRSRKERSSTAVADSDSFVYMIWEEEKHIQMAITRKRIEDEELKDRTEQSHGTWEEVYKNAKKADRLKNDLHERDDGELERTGQPLCIYEPYFGEGSWPFLHQRSLYRGVSLSSKGKRPGKDDFDAPSRLPLLNSIYYRDVLGEFGSFFAIANRIDRLHKNAWIGFQSWRATARKASLSRASENALLDAIQSKKNGDTLYFWARMDTDPRNPSQTDFWSFCDGINAGGCKPAFSEAMRRMYGLKDDVDALPPMPVDGDTWSVMSSWALPTRSFLEFVMFSRMFVDALDAQMYEEHHLTGHCPLSLSKDKHCYSRVLELLVNVWAYHSARRMVFVNPETGLMQEQHNFKNRRGQMRIKLFSYNTLKNMDEDLAELSDSEDPNRHWLWPSTGEVFWQGLYERERSLRHKEKEKRKQKSLEKLNRMRKRHRQQVIGKYVKPPPDMEESSNSSLLAV 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01092 961 Coils Coil 914 938 - -
Trre15g01092 961 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 83 450 - -
Trre15g01092 961 MobiDBLite consensus disorder prediction 926 940 - -
Trre15g01092 961 CDD GT4_PimA-like 87 451 - -
Trre15g01092 961 PANTHER GLYCOSYL TRANSFERASE FAMILY 1 PROTEIN 1 952 - -
Trre15g01092 961 Pfam Glycosyl transferases group 1 291 424 IPR001296 GO:0016757
Trre15g01092 961 Gene3D Glycogen Phosphorylase B; 236 436 - -
Trre15g01092 961 MobiDBLite consensus disorder prediction 913 961 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01092 Trre-Chr15 8452890 8459245 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01092 - - gmx:100806723 1560.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01092 15 8452890 8459245 Trre15g01092 15 8452890 8459245 ECH