Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01089 ATGATTCCTACATACAGAAACATGGATTCATACCCCTTTCACAGAAACCATATACCATCCCCTTATTATTATCATCCTGCCATGGAACATGTTCCCCCTCAAATGACCAAATCACCCTTCCCTTATGAACATCCTTGGCCTTATCCCACAAGTTATGGACCACATTTCTGCTATGACCATAACAACTTTCCTGGTTTCTATAGTCAAAGACCTTGTTATCCTCATGTTCCTCATACTCCTGCTTATTCTGGAGGTTGTCCTTTATATGGTGAACCATTTTCTGCTCCTTATTATCCACAATCACATTACACCATGGAGCTTCCAAGATATGAATATGATAAATATATGCTAAGGGACCGTCATTGTTGCGGTTGTTCTAATCATTTGTGCAACCAAAAGGAAGATAAAACAGTGAAGATTGAGGAGCAAGAACCTAATCTTGGTAAGAAAGAGAATGATGCTATGGTTCCAATTCAGTTTAGGAATTTTCCATACCCTTTGGTTTGGATTCCACAAGATTACTATGGTGACAAACAACCGAAAAATCCTACTAAAGCTGAGGTGAAGGGGCATGAAGATAAAGCGGGACATGAAAAAAAACTTACCGGTGACGAGAATGTGAATGCTGGTGTGCAGCCGGAATTTGAGCCAAGATTATGGAATGGATGGTTGCCCTTTAATGTAAAAGGTGCGCCAAACATGTTTCGCGATGGAGATGGGTTAAGAGGCCTTAAGAAGGAAACTGGTGATAATATAAAGGAGTCTGAAAATGGAAGAATGGATCAGAAAGATAAGAGTGAACAGCAAAAGATATCTGAATTTCCATTTCCATTCATTTGGTTTCCTTATGTCAATAAGGAGGAGGAAGGTGGAAGGACAAACAATCAGAAGAGCTATTCCACACCGGAACGTGTTGAGGAGGTACCTCATATATTCAAATCTTTTCCAGTGAAGTCTGCTATTGATGAAGGTGTTCCTAAAAGTACCAAATCAACTGATGTTGAGTCCAAAGATAGAAGTGCCTCCGATGTCACAGATAGAGGTAACCAGAGGAATATTCCTGTGAAGCAGATCGAGCTGAATCATCTGAAAAATAACACAAATGTATGTGAAAAGAGGGAAATGAATGTTTCTGAAGAGAATGTGACAAAGAAAGACTCTCACTCCATCTGCAAACAACGATCAACATCTTCGCCTAAGCGATCCAAGCTACCTCCTGTTTGTCTAAGAGTTGATCCACTGCCACGGAAGAAAAGCGGCAATGGGAGTTCTAGATCTCCAAGTCCACCGGCTTCTAGAGAACACTCCAAAGCTATACCTTGTGAAATAAGCAACACTCCTTCGGACAACATGGCAGATAAGACCGAGCGGAGTATTCAAAATGCACCAAAGGCTGGTGAGGAAGTTACACCAAAGGTGAAAACTTTTGCGGTATCCCAAAACATTCCTTCAGACAACATGACAGGCAAGACCGAGGTGAGCTCGAATATTCAAAATGTGCCAAAGGCTGGTGAGGAAGTTACACCAAAGATAAAAACTATTGAGGTAACCCAAAACAAGACTAATGAAAACAAAGGTGCAAATAAAAAAGAAAGAAAAGTACTGTCAGATAAAGATGCTGCTGTTTTGATACAAGCCGTTTATCGTGGGCATCTAGTGAGAAAATGGGAGTCCTTGAAAAAATTGAAGCAGATAGCTGAAGTTAGTAAGGAAGTTACTCATGTTAGAGACTATGTCAAAGCTTTTGAAGGTTCTTCTGATTTTCAAAATGATGGCAAGCAAAAGATTGCAATTGGAGAGACCATAATGAGACTATTACTGAAGTTGGATACTATACAGGGTTTGCATCCAAGTTTGAGGGAAATCAGAAAGTCTCTGGCTAGAGAGCTTGTGACCTTGCAGGAAAGGCTTGATTCTATAACGGCGGATAAGTATCCTCAGCAGCAGATACAAGAGTTTGATGCTAAGGAATCTGTCCAAGTCTCTCCAATGAGTATTCAGAATGGAGAACATAATCAAGAGCATCAAGAAGAGACAATGACATCACAAGAAGATCCATCTGAAGTTATAAGTGATGGGAAACATCAGGATCAGTTCTGCATGGAGGATAATGGTGGTGGAAGTGAACCTTCGTCTCACGTTGATCCTGCATCAATTGAAGGAACAACGCCTACTGTGTTACTGAATGGAACAGTTAATGAGGATGTAAGCCAGGTGGTTGCTGAGGCGTTGGATTCAACAAGTAAGCCTTCGGACAAAGTGGACGCAGAATGCAAATTGAAATCAGAGGTTGTTGACATACCTCTTGGGGTTGATAAACTGGATATGACTGGTTTGGAAGAATTGCCTGTGGGAGTTATTCGCGAAAATGTCATTGGCGATTCAGCAAGTGAAGGGTTAGATTCTGATACACCTGCAATGCAGGTACTACTAGTGGGAGTGCTCGATGAAGACACGACTACATCTGATGAGACTAATACCTCTGATATGGGTGCAATGAAGGTGCTACCAGTGGGAGTGCTCGATGAAGATTCCGGTAAATCTGAAGAGACTAATACCTCTGATATGCATGCAATGAAGGTGCTACCGGTGGGTGTGCTTGATGAAGACACTGATATGGATGCAATGAAGGTGCTACCGGTGGGAGTGCTCGATGAAGATGCGGCTAAATCTGAAGAGACTAATACCTCTGATATGCATGCAATGAAGGTGCTACCGGTGGGTGTGCTCGATGAAGACACTGATATGGATGAAATAAAGGTGCTACCGGTGGGAGTGCTTGATGAAGACACGGCTGCATGTGAAGAGACTAATAGCTCTGAAAGTGAAGTGCAAGAAGAAAATGAGGTATTGAATGAAGAACTCCCAGTAGGATTGATTGATGAGGATGCAAAGAAATCTGAATATAATACTGAAGATACACAACTAGAGCAGTCACTGGTCGAAGAGAAAGAAGAGGTGAAAGAATCTAGTGAAGAATCAGATGGTTGGGTAGGAATTGAGTTGCAAAAAGATGATGATGAAGTCAAAGTGGATGCATCAATGGACACAGAGGAATCAGGAACTGGAAATGATAGTAAGTTATCATCTCCAGAAAGTCCTGCTCATGGAAATGAAGAAGCGAGCGTAGAAGGAAATGATGTAGCTCCCATGTTGAATGAAAATGAAGCAGAAGAGAAGAAGCTTGCACAGCAAGAAACACAAGTTGATGCAGAGTTGAATGGTGACATGAAATTATTGGAAGAGAATGAAAAGTTAAGAAAGTTAATGAAAGAGTTGCTTGAAGCTGGGAATAAACAGTTAAGTGTAATAACAAATTTGACAGGGAGAGTGAAAGATTTGGAGAAGAAATTAGCCAAAACTAAGAGAAATAAGAAAGTGAAGACAAAGAGACATAAACCAGTAACTCCAAAAATGTCTAGCTCAAACTCTTCTGAGTAA 3441 0.4101 MIPTYRNMDSYPFHRNHIPSPYYYHPAMEHVPPQMTKSPFPYEHPWPYPTSYGPHFCYDHNNFPGFYSQRPCYPHVPHTPAYSGGCPLYGEPFSAPYYPQSHYTMELPRYEYDKYMLRDRHCCGCSNHLCNQKEDKTVKIEEQEPNLGKKENDAMVPIQFRNFPYPLVWIPQDYYGDKQPKNPTKAEVKGHEDKAGHEKKLTGDENVNAGVQPEFEPRLWNGWLPFNVKGAPNMFRDGDGLRGLKKETGDNIKESENGRMDQKDKSEQQKISEFPFPFIWFPYVNKEEEGGRTNNQKSYSTPERVEEVPHIFKSFPVKSAIDEGVPKSTKSTDVESKDRSASDVTDRGNQRNIPVKQIELNHLKNNTNVCEKREMNVSEENVTKKDSHSICKQRSTSSPKRSKLPPVCLRVDPLPRKKSGNGSSRSPSPPASREHSKAIPCEISNTPSDNMADKTERSIQNAPKAGEEVTPKVKTFAVSQNIPSDNMTGKTEVSSNIQNVPKAGEEVTPKIKTIEVTQNKTNENKGANKKERKVLSDKDAAVLIQAVYRGHLVRKWESLKKLKQIAEVSKEVTHVRDYVKAFEGSSDFQNDGKQKIAIGETIMRLLLKLDTIQGLHPSLREIRKSLARELVTLQERLDSITADKYPQQQIQEFDAKESVQVSPMSIQNGEHNQEHQEETMTSQEDPSEVISDGKHQDQFCMEDNGGGSEPSSHVDPASIEGTTPTVLLNGTVNEDVSQVVAEALDSTSKPSDKVDAECKLKSEVVDIPLGVDKLDMTGLEELPVGVIRENVIGDSASEGLDSDTPAMQVLLVGVLDEDTTTSDETNTSDMGAMKVLPVGVLDEDSGKSEETNTSDMHAMKVLPVGVLDEDTDMDAMKVLPVGVLDEDAAKSEETNTSDMHAMKVLPVGVLDEDTDMDEIKVLPVGVLDEDTAACEETNSSESEVQEENEVLNEELPVGLIDEDAKKSEYNTEDTQLEQSLVEEKEEVKESSEESDGWVGIELQKDDDEVKVDASMDTEESGTGNDSKLSSPESPAHGNEEASVEGNDVAPMLNENEAEEKKLAQQETQVDAELNGDMKLLEENEKLRKLMKELLEAGNKQLSVITNLTGRVKDLEKKLAKTKRNKKVKTKRHKPVTPKMSSSNSSE 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01089 1146 MobiDBLite consensus disorder prediction 671 691 - -
Trre15g01089 1146 Coils Coil 934 954 - -
Trre15g01089 1146 Coils Coil 1076 1099 - -
Trre15g01089 1146 MobiDBLite consensus disorder prediction 1115 1146 - -
Trre15g01089 1146 ProSiteProfiles IQ motif profile. 537 566 IPR000048 GO:0005515
Trre15g01089 1146 Coils Coil 1104 1131 - -
Trre15g01089 1146 SUPERFAMILY BAG domain 557 640 IPR036533 GO:0051087
Trre15g01089 1146 MobiDBLite consensus disorder prediction 178 208 - -
Trre15g01089 1146 MobiDBLite consensus disorder prediction 961 1015 - -
Trre15g01089 1146 MobiDBLite consensus disorder prediction 669 691 - -
Trre15g01089 1146 MobiDBLite consensus disorder prediction 244 266 - -
Trre15g01089 1146 MobiDBLite consensus disorder prediction 376 391 - -
Trre15g01089 1146 Gene3D BAG domain 551 644 IPR036533 GO:0051087
Trre15g01089 1146 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 33 1133 IPR040400 -
Trre15g01089 1146 MobiDBLite consensus disorder prediction 328 345 - -
Trre15g01089 1146 MobiDBLite consensus disorder prediction 323 354 - -
Trre15g01089 1146 FunFam BAG family molecular chaperone regulator 6 554 645 - -
Trre15g01089 1146 Pfam BAG domain 565 639 IPR003103 GO:0051087
Trre15g01089 1146 MobiDBLite consensus disorder prediction 439 457 - -
Trre15g01089 1146 MobiDBLite consensus disorder prediction 1017 1036 - -
Trre15g01089 1146 ProSiteProfiles BAG domain profile. 564 641 IPR003103 GO:0051087
Trre15g01089 1146 MobiDBLite consensus disorder prediction 376 468 - -
Trre15g01089 1146 MobiDBLite consensus disorder prediction 1121 1135 - -
Trre15g01089 1146 SMART BAG_1 564 641 IPR003103 GO:0051087
Trre15g01089 1146 Coils Coil 623 643 - -
Trre15g01089 1146 MobiDBLite consensus disorder prediction 961 1067 - -
Trre15g01089 1146 Pfam IQ calmodulin-binding motif 539 556 IPR000048 GO:0005515
Trre15g01089 1146 MobiDBLite consensus disorder prediction 180 204 - -
Trre15g01089 1146 Coils Coil 973 993 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01089 Trre-Chr15 8426075 8429603 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01089 - - tpra:123883600 1602.03