Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01079 ATGAAGGATTTGAATTCCGATCTCTTTGACCCTGTCACCGTCATGGAATCCGAATGGGCTCACGGTGGTGGTTCAACTTCCGATGCTGATTTCGGATTCGCTTTCAATGACAGTAATTTCTCCGATAGGGTTCTTCGTATTGAGATCATGCCTGACCCTGTTGATCCTCAGCCTGATTCTGAACTTTGTACCACCATCGCTGATTGGGCTCGACATCGGAAGAGGAGACGCGAAGATGTTAAGAAAGAAAACGGTGTGGATATGCCGGATGAGCAAATTTTGAATGGGAACCAACCTGAGATGGATGATTTTGTGGCTTCTGAAAATCAGGATGAAGAGGTCGTTGCAATGGTTGAGGAGTTTCCTTCTGGTGATGAAGCCGTTAATAGCAATGATGATCCAAACCCGGGCATGGACTTTTCTGAAGCTGATGTTAGAGTTAAAACCCTACATATCAGTTCTCCTATTTTGGCCGCAAAAAGCCCTTTCTTCTATAAGCTTTTCTCTAATGGGATGAGGGAATCAGAGCTGAGACATGTCACCCTCAGAATTAATGCCTCTGAAGAAGCTGCTCTCATGGAGCTACTGAATTTTATGTATAGCAATAGCTTGAGCGTTAGGACCGCACCTGGTTTGCTTGATGTGTTGATGGCTGCAGATAAATTTGAAGTTGCTTCATGCATGAGACTTTGTAGTCGGTTGTTGCGAAATTTGGACATGACACCTGAATCTGCATTGCTTTACCTGGAGCTTCCCTCTAGTGTCTTAATGGCTGATGCAGTTCAACCATTGACCGATGCTGCAAAGCAGTATCTTGCTGGCCGATACAAAGATATAACCAAGCAAGTGTTCCAGGAAGAGGTTATGAGCTTGCCCTTAGCTGGAATAGAGGCAATATTATCTAGTGATGATCTCCAGGTTGCATCAGAAGATGCAGTATACGATTTTGTGTTGAAATGGGCAAGACACCAGTACAGCAATCTGGAAGAAAGGCGAGAAGTTCTAGGTGCACGGCTTGCACGATTAATTCGTTTCCCATATATGACCTGCCGAAAGCTTAAGAAGGTCTTAACATGTAGTGATTTTGAACATGATGTTTCATCCAAGCTTGTACTTGAAGCCCTGTTTTTCAAGGCAGAGGTTCCACATCGCCAACGATCACTAGCAGCAGAAGAGCCCGCTTTCTCAAGCCGTCGTTTCTTGGAGAGGGCATACAAATATCGTCCCGTCAAGGTGGTTGAATTTGAACTTCCCCGCCAGCAGTGTGTGGTGTACTTGGATCTAAAGCGTGAGGAGTGTTCCAATTTGTACCCATCCGGCCGGGTTTATTCGCAGGCATTCCACTTGGGTGGACAGGGATTTTTCCTTTCAGCACATTGTAACATGGATCAGCAAAGCTCTTTCCATTGTTTTGGCCTATTTCTTGGAATGCAGGAGAAGGGATCCGTCAGCTTCACTGTGGACTATGAATTTGCTGCGAGGTCAAGACCAACAGAAGAGTTTGTCAGCAAATACAAAGGCAATTACACGTTCACAGGTGGCAAGGCCGTTGGCTACAGAAACTTGTTTGCGATTCCATGGACTTCATTCATGGCTGAGGATTGTCTTTACTTCATCAACGGTGTTCTACATCTCAGGGCCGAGCTCACCATCAGACATTCCAATTTGTAA 1671 0.4524 MKDLNSDLFDPVTVMESEWAHGGGSTSDADFGFAFNDSNFSDRVLRIEIMPDPVDPQPDSELCTTIADWARHRKRRREDVKKENGVDMPDEQILNGNQPEMDDFVASENQDEEVVAMVEEFPSGDEAVNSNDDPNPGMDFSEADVRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTLRINASEEAALMELLNFMYSNSLSVRTAPGLLDVLMAADKFEVASCMRLCSRLLRNLDMTPESALLYLELPSSVLMADAVQPLTDAAKQYLAGRYKDITKQVFQEEVMSLPLAGIEAILSSDDLQVASEDAVYDFVLKWARHQYSNLEERREVLGARLARLIRFPYMTCRKLKKVLTCSDFEHDVSSKLVLEALFFKAEVPHRQRSLAAEEPAFSSRRFLERAYKYRPVKVVEFELPRQQCVVYLDLKREECSNLYPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFTVDYEFAARSRPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMAEDCLYFINGVLHLRAELTIRHSNL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01079 556 SMART BACK_2 254 358 IPR011705 -
Trre15g01079 556 Coils Coil 556 556 - -
Trre15g01079 556 Gene3D Potassium Channel Kv1.1; Chain A 138 257 IPR011333 -
Trre15g01079 556 ProSiteProfiles BTB domain profile. 148 208 IPR000210 GO:0005515
Trre15g01079 556 FunFam BTB/POZ domain-containing protein POB1 131 260 - -
Trre15g01079 556 SUPERFAMILY POZ domain 149 236 IPR011333 -
Trre15g01079 556 SMART BTB_4 112 239 IPR000210 GO:0005515
Trre15g01079 556 FunFam BTB/POZ domain-containing protein POB1 273 379 - -
Trre15g01079 556 SUPERFAMILY TRAF domain-like 440 551 - -
Trre15g01079 556 Gene3D - 275 379 - -
Trre15g01079 556 Pfam BTB/POZ domain 148 236 IPR000210 GO:0005515
Trre15g01079 556 Pfam BTB And C-terminal Kelch 263 356 IPR011705 -
Trre15g01079 556 CDD BTB_POZ_ZBTB_KLHL-like 143 222 - -
Trre15g01079 556 PANTHER OS02G0260700 PROTEIN 24 553 IPR045890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01079 Trre-Chr15 8358210 8361241 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01079 - - gmx:100817612 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01079 15 8358210 8361241 Trre15g01079 15 8358210 8361241 ECH