Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01068 ATGGCAACTTTCACGTTGAAAACCGCAACCAACGTGCTTCACAGACACCATAACAACCTCACCTTCTTCTCCAATAACACCACTACAAGGACAAATCTCCCAATTTCGCACAAGAGGAGATCGCGTTTGGTTCCCAAAGTTTCAATGTCAGCTACAACAGTTCAGACTTTTCTTGAAAAGTCTTCTCCTTCCACCAAGAGCACTGCAATTCCAATAATGGTTAATGCATGCACTGGAAAAATGGGAAAGGCTGTTATTAATGCAGCAGAAGCTGCTGGACTGAATGTTGTTCCGGTGTCGTTTGGGTGTGAAGAGGAGTCCGGACAGACTTTTGAGGTCTGTGGAAGGGAGTTCCTTGTGCATGGTCCTTCAGATAGAGAGAGTTTTCTTGAATCTGTTCGTGATAAATATCCAAACTTAATTATTGTCGACTACACAGTACCAGATGCAGTCAATGGCAATGCAGAGTTATACAGTAAGGTTGGGGTACCCTTTGTGATTGGGACCACTGGTGGGGATAGGGACTTGTTATATAAGACTGTTGAAGACTCAAATAATTATGCGGTGATATCCCCACAAATGGGAAAACAGGTTGTTGCTTTTCTTGCAGCTATGGAAATTATGGCGGAGCAATTTCCTGGAGCCTTTTCTGGATATTCCTTACAGGTATTAGAGTCTCATCAAGCAAGCAAAGTTGATGCATCTGGAACTGCCAAGGCTGTGATATCATGCTTCCAGAAACTGGGTGTGTCTTTCGATATGGATGAGATACAATTGATCAGGGACCCCAGGCAACAAGTTGAATTGGTGGGAGTCCCAGAGGAGCATTTGTTGGGTCATGCGTTTCATATGTATCATTTGACATCACCAGATGAAACAGTTTCGTTTGAGTTCCAACATAATGTTTGTGGTAGATCAATTTATGCCGAGGGCACTGTTGACGCTGTACTATTTCTTGCTAAGAAGATTGAAGCAAAGGATCCGAAGAGAATATACAATATGATTGATGTCTTGCGAGAGGGTAATATGCGATAA 1035 0.428 MATFTLKTATNVLHRHHNNLTFFSNNTTTRTNLPISHKRRSRLVPKVSMSATTVQTFLEKSSPSTKSTAIPIMVNACTGKMGKAVINAAEAAGLNVVPVSFGCEEESGQTFEVCGREFLVHGPSDRESFLESVRDKYPNLIIVDYTVPDAVNGNAELYSKVGVPFVIGTTGGDRDLLYKTVEDSNNYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQASKVDASGTAKAVISCFQKLGVSFDMDEIQLIRDPRQQVELVGVPEEHLLGHAFHMYHLTSPDETVSFEFQHNVCGRSIYAEGTVDAVLFLAKKIEAKDPKRIYNMIDVLREGNMR 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01068 344 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 69 338 IPR036291 -
Trre15g01068 344 Gene3D Dihydrodipicolinate Reductase; domain 2 196 303 - -
Trre15g01068 344 Pfam Dihydrodipicolinate reductase, C-terminus 198 338 IPR022663 GO:0008839|GO:0009089
Trre15g01068 344 PANTHER DIHYDRODIPICOLINATE REDUCTASE 32 342 IPR023940 GO:0008839|GO:0009089
Trre15g01068 344 Pfam Dihydrodipicolinate reductase, N-terminus 70 192 IPR000846 GO:0008839|GO:0009089
Trre15g01068 344 NCBIfam dihydrodipicolinate reductase 70 344 IPR011859 GO:0008839|GO:0009089|GO:0070402
Trre15g01068 344 Gene3D - 72 338 - -
Trre15g01068 344 FunFam 4-hydroxy-tetrahydrodipicolinate reductase 2 chloroplastic 70 226 - -
Trre15g01068 344 FunFam 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 196 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01068 Trre-Chr15 8303941 8308536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01068 K00215 - gmx:100807997 570.081