Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01065 ATGGAGATTGGGTTTTTGGGTTTGGGGATAATGGGCAAAGCTATGTCAATTAACCTTCTAAAACATGGTTTCAAGGTCACTGTTTGGAACAGAACCCTCTCCAAGTGTGATGAACTCGTGGAGCATGGTGCTTCAGTTGGAGAAACACCTGCAGCTGTAGTCAAGAAATGCAAGTATACAATTGCAATGTTATCTGATCCTTCAGCTGCTCTGTCGGTTGTGTTTGATAAGGATGGTGTTCTTGAACAAATTAACGGAAAAGGTTATATTGACATGTCAACAGTTGATGCCGAGACATCTATCAAGATATCTGAGGCAATCAAAGAAAAAGGCGGTGACTTCCTTGAAGCTCCTGTTTCGGGTAGCAAGAAGCCTGCAGAAGATGGCCAGCTAGTAATACTTGCTGCTGGCGACAAGGCATTCTATGACGAAGCACTTCCAGCATTTGATGTACTTGGGAAGAAATCTTTCTTTCTCGGTGAGGTTGGAAATGGTGCAAAAATGAAACTTGTTGTCAACATGGTAATGGGAAGTATGATGAATGCTTTCTCTGAGGGACTGACACTTGCTGAAAGAAGTGGCTTGAACCCTGGCACACTTCTTGATGTGCTGGATCTTGGTGCTATAAGTAACGGCATGTTTAAATTGAAAGGACCGACAATGCTTAAGAACAGTTACCCCCCTGCTTTTCCACTGAAACATCAGCAAAAAGACATGAGACTGGCTCTTGCCCTTGGAGATGAAAATGCTGTACCAATGCCTGTTGCGGCTGCGGCAAATGAGGCATTCAAGAAAGCCAGAAGCATGGGTTTAGGAGACCTTGATTTTTCAGCTGTCCATGAGACCTTGAAATGA 855 0.4374 MEIGFLGLGIMGKAMSINLLKHGFKVTVWNRTLSKCDELVEHGASVGETPAAVVKKCKYTIAMLSDPSAALSVVFDKDGVLEQINGKGYIDMSTVDAETSIKISEAIKEKGGDFLEAPVSGSKKPAEDGQLVILAAGDKAFYDEALPAFDVLGKKSFFLGEVGNGAKMKLVVNMVMGSMMNAFSEGLTLAERSGLNPGTLLDVLDLGAISNGMFKLKGPTMLKNSYPPAFPLKHQQKDMRLALALGDENAVPMPVAAAANEAFKKARSMGLGDLDFSAVHETLK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01065 284 FunFam Glyoxylate/succinic semialdehyde reductase 2 163 284 - -
Trre15g01065 284 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 161 IPR036291 -
Trre15g01065 284 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 281 IPR029154 GO:0051287
Trre15g01065 284 PIRSF HIBADH 1 284 IPR015815 GO:0016491
Trre15g01065 284 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 5 18 IPR002204 GO:0016491
Trre15g01065 284 Gene3D - 1 162 - -
Trre15g01065 284 PANTHER OXIDOREDUCTASE GLYR1-RELATED 2 283 - -
Trre15g01065 284 Gene3D - 163 284 IPR013328 GO:0016491
Trre15g01065 284 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 2 157 IPR006115 GO:0050661
Trre15g01065 284 FunFam Putative oxidoreductase GLYR1 homolog 1 162 - -
Trre15g01065 284 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 161 283 IPR008927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01065 Trre-Chr15 8286152 8291818 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01065 K18121 - gmx:100802847 507.679