Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01061 ATGTCTTCTCCTCTGACTCAACCTCTTCTATGCCTATTCCTGGCTCTTCTCTTCTTCGCCGGAACATCTTCATCGGCACGTGTTTCGGATGAGTTGGAGCGTGGAGGAGGAAAGCAGAGAGAGTTTGATTATTTCGCTTTAGCGTTACAATGGCCTGGTACTTATTGTCAACGTTCGCGTAAATGTTGTTCCTCTAATGCTTGCTGCAGAGGCTCCAATTCTCCGGCAACATTCACAATACATGGACTGTGGCCTGACTATAATGATGGAACTTGGCCGGCATGTTGCACTAATTCTCGTTTTGATCCAAAAGAGATATCAACATTGAATGATGCTTTAGAGAAATATTGGCCATCATTGAGCTGTGGCTCACCATCATCATGCAGTGGTGGAAAAGAGAAGCATGGCACATGCTCATATCCTGTGGTTGGAAATGAATATGAATATTTCTTGACAACACTTAATGTTTATTTCAAATATAATGTTACGAGTGTTCTAAACGATGCTGGATATGTTCCGTCAAACACAGAAAAGTATCCCCTCGGTGGTATTATCTCTGCCATTGAGAATGCTTTCCATGCATCTCCTCAAATAATTTGCTCAAAAGGTTCTATAGAGGAACTTCGTCTATGCTTCTATAAGGACTTCGAGCCACGTGATTGTGCTATTGGATCAAATAAAATTGACATGGTTACATCAAAAGGATCATGTCCTAAATATGTTAGCTTGCCCGAATTTGTATCAACAGGTAAGTTCATCACTCTTTGA 768 0.4115 MSSPLTQPLLCLFLALLFFAGTSSSARVSDELERGGGKQREFDYFALALQWPGTYCQRSRKCCSSNACCRGSNSPATFTIHGLWPDYNDGTWPACCTNSRFDPKEISTLNDALEKYWPSLSCGSPSSCSGGKEKHGTCSYPVVGNEYEYFLTTLNVYFKYNVTSVLNDAGYVPSNTEKYPLGGIISAIENAFHASPQIICSKGSIEELRLCFYKDFEPRDCAIGSNKIDMVTSKGSCPKYVSLPEFVSTGKFITL 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01061 255 ProSitePatterns Ribonuclease T2 family histidine active site 1. 78 85 IPR018188 GO:0003723|GO:0033897
Trre15g01061 255 SUPERFAMILY Ribonuclease Rh-like 41 244 IPR036430 GO:0003723|GO:0033897
Trre15g01061 255 CDD RNase_T2_euk 42 239 IPR033697 -
Trre15g01061 255 PANTHER RIBONUCLEASE T2 23 239 IPR001568 GO:0003723|GO:0033897
Trre15g01061 255 Pfam Ribonuclease T2 family 42 221 IPR001568 GO:0003723|GO:0033897
Trre15g01061 255 Gene3D - 38 248 IPR036430 GO:0003723|GO:0033897
Trre15g01061 255 FunFam Ribonuclease T2 38 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01061 Trre-Chr15 8266342 8270491 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01061 K01166 - gmx:100789614 380.948