Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01059 ATGAAGGAACCTCTGCAGCTCCTCTTTGTAATTACCTTTCTCGGTTCGTTCCTCCGTGCAAGGCCAGAAACTGACTCTTGTACCAGCAATCTGAACCTCAAAGCTCCAACCCCTTTTGATACAACCAATCTCCAATGCCTTTCTGCATGGGATGCTCAAGGTTTCATCCTCAGATATGTTCAGACTTCTACAAACATTTGGAGCTTCATTCTCTCAACTCCAGACACAAATTCTTACATAGCTATCGGATTTTCGGCCAGCGGAAGCATGGTAGGTTCAAGTGCAATTGTGGGGTGGGTGGCATCTAGAGGAGCCAGTGGAGGGATAAAGCAGTATTATCTTGGTGGGGTTACCCCAAATCAGGTAGTTCCTGATAAAGGAAACTTGCAGGTTATAGGCAATTCATCATTCATCAGTTTGCAATCTTCTCGTTTATATATGGTGTTTCAGTTAGAAACCACTGAACCTTTGTCCTGGTTGATACTTGCCACTGGATCCACTGGTTTATTCCCTGCAGCACCAAATTATTCACTAACAAAACACTTAGACAAGTTTTCCACAAGAATAGATTACTCAAAAGCAAACAATGGAAGTTCACAAGTGAATGGAAGTTCTTCACAAGGAGATGGAAATAGTTCACAAGGTGATTCATGTGACTCCAAGTTAAACCTCAGTGTTCCTCTCAACTTTGACACAACCAAGCTCAATTGCCTTTCTGTTTGGAATGCTCAAGGATACATTCTTAGATATTCTCAGACTTCTTCAAACATATGGAGCTTCATTCTCTCAGCTCCAAACCAAAATTCTTATATATCAATAGGGTTCTCTCCCAATGGAGGCATGGTAGGTTCAAGTGCAATTGTAGGGTGGATATCATCCAATGGAGCTATTGGTGGCATGAAACAATATTATCTAGCAGGGTATGCACCAAACCAAGTGGTTCCAGATAGAGGCAACTTACCAATTATTAACAATTCAACTATGATCACATCACAATCATCGCGTTTATACATGGTTTTCCAACTACAAACTAATCAACCTTTGTCGCCGTTGATCTATGCAATTGGACCCAATGGCGTCTTCCCTACAGTTCCAAGTTTTGCTCTAATGCAGCACCAAGACAAAGTTTCTGTAACTGTGAATTATGCTACAGGTTCAAGTGTATTAGGAAACTCATATATGAACCTAAAAAGAAGTCATGGAGTGTTAAATATATTGGGATGGGGTATATTTATCATAATGGGAGCAATAGTTGCTCGTTACTTCAAGGATTGGGATCCATTTTGGTTTAATTTCCATGCTTCAGTTCAATCATTGGGCTTTATACTCGGATTAATAGGTGTAATTAGTGGGCTTATCCTCAATAATAAACTCCATGTTGATTTTAATCTTCACAAGGCCCTTGGAATCATCATTCTTGTTCTTGCTTGCCTTCAGGTAATGGCTTTTGTTGCTCGACCAAAAAAGGAATCAAAAGTTAGAAAGCATTGGAATTTATACCATCATAACATAGGGAGAATAGTGATTATACTAGCCATAGCCAACATTTTCTATGGAATCCATTTAGGCAAGGAAGGAAGTGAATGGATGGTAGCTTATGGAATTGTGCTTGCAGTATTACTCTCTATTGCAGTCATTTTTGAAATTGGACTATGGAGTAAAGACTAA 1668 0.3963 MKEPLQLLFVITFLGSFLRARPETDSCTSNLNLKAPTPFDTTNLQCLSAWDAQGFILRYVQTSTNIWSFILSTPDTNSYIAIGFSASGSMVGSSAIVGWVASRGASGGIKQYYLGGVTPNQVVPDKGNLQVIGNSSFISLQSSRLYMVFQLETTEPLSWLILATGSTGLFPAAPNYSLTKHLDKFSTRIDYSKANNGSSQVNGSSSQGDGNSSQGDSCDSKLNLSVPLNFDTTKLNCLSVWNAQGYILRYSQTSSNIWSFILSAPNQNSYISIGFSPNGGMVGSSAIVGWISSNGAIGGMKQYYLAGYAPNQVVPDRGNLPIINNSTMITSQSSRLYMVFQLQTNQPLSPLIYAIGPNGVFPTVPSFALMQHQDKVSVTVNYATGSSVLGNSYMNLKRSHGVLNILGWGIFIIMGAIVARYFKDWDPFWFNFHASVQSLGFILGLIGVISGLILNNKLHVDFNLHKALGIIILVLACLQVMAFVARPKKESKVRKHWNLYHHNIGRIVIILAIANIFYGIHLGKEGSEWMVAYGIVLAVLLSIAVIFEIGLWSKD 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01059 555 SMART DOMON_3 79 165 IPR005018 -
Trre15g01059 555 SMART DOMON_3 270 356 IPR005018 -
Trre15g01059 555 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 216 552 - -
Trre15g01059 555 SMART 561_7 399 520 IPR006593 -
Trre15g01059 555 Pfam Eukaryotic cytochrome b561 400 520 IPR006593 -
Trre15g01059 555 ProSiteProfiles DOMON domain profile. 53 165 IPR005018 -
Trre15g01059 555 CDD DOMON_DOH 46 146 IPR045266 -
Trre15g01059 555 Gene3D - 375 553 - -
Trre15g01059 555 CDD DOMON_DOH 236 377 IPR045266 -
Trre15g01059 555 Pfam DOMON domain 247 312 - -
Trre15g01059 555 ProSiteProfiles Cytochrome b561 domain profile. 364 555 IPR006593 -
Trre15g01059 555 CDD Cyt_b561_FRRS1_like 377 549 - -
Trre15g01059 555 ProSiteProfiles DOMON domain profile. 244 359 IPR005018 -
Trre15g01059 555 MobiDBLite consensus disorder prediction 195 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01059 Trre-Chr15 8258694 8264479 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01059 - - lang:109356980 859.751