Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01048 ATGCCGACCGGCGAACTCCGATCACCACCAAAATCAACAAACAATTCCACCGCCACAGCTGTCATCGGATTTGAAGACGAAGGTTGGTTATGGTCTCAAATCAAAGCTGAAGCACGCCGTGATGCTGAATCGGAACCGGCGTTAGCGAGTTATCTCTACTCAACGATTCTCTCTCATGCTTCACTTGAACGATCACTTTCGTTTCATCTTGGTAACAAGCTTTGTTCATCAACGCTTCTTTCAACTCTTCTCTATGATCTTTTTCTCAATGCTTTTGCTACTGATCCTTCTTTGAGTTCTGCTGCTGTTGCTGATCTTCGTGCTGCTCGTGAACGTGATCCTGCTTGTATCTCTTACTCTCACTGTCTTCTCAATTACAAAGGATTTCTCGCTTGTCAGGCACACCGTGTGTCACACTTGTTGTGGAGGCAGGCTAGGCGTCCCTTAGCATTGGCACTACATTCTCGCGTTGCTGATGTATTTGCTGTGGATATTCACCCGGCAGCGAGGATTGGGAAAGGAGTTCTGTTTGACCATGCCACAGGAGTGGTGGTAGGTGAGACGGCGGTGATTGGAAATAATGTGTCGATCCTGCACCATGTCACATTGGGTGGGACTGGAAAGGTTGGTGGGGACCGCCATCCCAAGATTGGGGATGGAGTGCTCATTGGTGCTGGTGCTACCATTCTGGGCAATGTTAAGATTGGGGAAGGTGCTAAGATAGGTGCTGGTTCTGTTGTTTTGATTGATGTGCCACCGAGGACCACTGCTGTTGGGAACCCGGCGAGATTGGTTGGTGGTAAGGAGAAGCCATCTAAGCATGAGGATGTGCCTGGGGAGTCGATGGACCATACTTCTTTTATCTCTGAGTGGTCTGATTATATCATTTGA 891 0.4848 MPTGELRSPPKSTNNSTATAVIGFEDEGWLWSQIKAEARRDAESEPALASYLYSTILSHASLERSLSFHLGNKLCSSTLLSTLLYDLFLNAFATDPSLSSAAVADLRAARERDPACISYSHCLLNYKGFLACQAHRVSHLLWRQARRPLALALHSRVADVFAVDIHPAARIGKGVLFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIGDGVLIGAGATILGNVKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSKHEDVPGESMDHTSFISEWSDYII 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01048 296 Gene3D Hexapeptide repeat proteins 164 285 - -
Trre15g01048 296 NCBIfam serine O-acetyltransferase 104 263 IPR005881 GO:0005737|GO:0006535|GO:0009001
Trre15g01048 296 SMART SATase_N_2_a 30 134 IPR010493 GO:0005737|GO:0006535|GO:0009001
Trre15g01048 296 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 223 251 IPR018357 GO:0016740
Trre15g01048 296 Gene3D serine acetyltransferase, domain 1 12 163 IPR042122 -
Trre15g01048 296 SUPERFAMILY Trimeric LpxA-like enzymes 29 266 IPR011004 -
Trre15g01048 296 Pfam Bacterial transferase hexapeptide (six repeats) 214 247 IPR001451 -
Trre15g01048 296 Pfam Hexapeptide repeat of succinyl-transferase 181 197 IPR001451 -
Trre15g01048 296 MobiDBLite consensus disorder prediction 261 283 - -
Trre15g01048 296 PANTHER SERINE ACETYLTRANSFERASE 12 296 - -
Trre15g01048 296 FunFam Serine acetyltransferase 164 289 - -
Trre15g01048 296 CDD LbH_SAT 161 261 IPR045304 -
Trre15g01048 296 Pfam Serine acetyltransferase, N-terminal 30 134 IPR010493 GO:0005737|GO:0006535|GO:0009001
Trre15g01048 296 MobiDBLite consensus disorder prediction 267 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01048 Trre-Chr15 8148029 8149600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01048 30 284 Miscellaneous Gene Families AT2G17640 54.902 4.89e-90 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01048 K00640 - gmx:547632 525.398