Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01024 ATGGCGAGAGTTAAGCACAAACCTCGTCCTGCAAATGAGGCTGAGGAGAAGAAGAAAAGAAAGTTTAAGCCTGGAACAGTAGCACTTCGTGAGATTCGTAAATTTCAAAAATCTGTTAACTTACTTATACCTTGTGCTCCGTTTGTAAGATGTGTCAGACAAATTACACAACAACTATCTACCCAGGTCTCGCGCTGGACGGCTGAAGCCTTACAAGCACTTCAGGAGGCAGCTGAGGACTATCTGGTTCGTATGTTTGAATCTGGAATGCTCTGTGCACTTCACGCAAGGCGTGTTACCCTTATGAAAAAGGATATTGAGTTGATACGTAGGCTTACCGGAATAGGAAGGCCTTGGTGA 360 0.4444 MARVKHKPRPANEAEEKKKRKFKPGTVALREIRKFQKSVNLLIPCAPFVRCVRQITQQLSTQVSRWTAEALQALQEAAEDYLVRMFESGMLCALHARRVTLMKKDIELIRRLTGIGRPW 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01024 119 PRINTS Histone H3 signature 38 55 IPR000164 GO:0000786|GO:0003677|GO:0030527
Trre15g01024 119 PRINTS Histone H3 signature 14 35 IPR000164 GO:0000786|GO:0003677|GO:0030527
Trre15g01024 119 PRINTS Histone H3 signature 79 95 IPR000164 GO:0000786|GO:0003677|GO:0030527
Trre15g01024 119 PRINTS Histone H3 signature 95 116 IPR000164 GO:0000786|GO:0003677|GO:0030527
Trre15g01024 119 Gene3D Histone, subunit A 1 115 IPR009072 GO:0046982
Trre15g01024 119 PANTHER HISTONE H3 7 114 IPR000164 GO:0000786|GO:0003677|GO:0030527
Trre15g01024 119 MobiDBLite consensus disorder prediction 1 20 - -
Trre15g01024 119 SMART h35 14 117 IPR000164 GO:0000786|GO:0003677|GO:0030527
Trre15g01024 119 FunFam Histone H3.2 18 117 - -
Trre15g01024 119 SUPERFAMILY Histone-fold 10 115 IPR009072 GO:0046982
Trre15g01024 119 Pfam Core histone H2A/H2B/H3/H4 8 112 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01024 Trre-Chr15 7982853 7988271 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01024 K11253 - gmx:100811872 162.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01024 15 7982853 7988271 Trre15g01024 15 7982853 7988271 ECH