Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01014 ATGGGAGAACATGAAGAGTGGGCACAGCCACAAAGTGGGCTATTGCCAAATGGTTTATTACCAAATGAAGCTGCTTCTGTGATACAGGTGCTTGATTCGGAGCGGTGGGCGAAGGCTGAACAAAGAACTGCAGAGCTTATTGCCTGCATTCAGCCTAATTCACCCTCCGAGCAACGCCGAAATGCAGTTGCAGAATATGTCCAAAAGCTGATCACAAAGTGCTTCCCTTGTCAGGTGTTCACCTTTGGGTCGGTTCCTCTAAAAACTTATTTGCCTGATGGAGATATTGACTTAACAGCATTCTGTAAGAATCAAAGTTTGAAGGATAATTGGGCACATCAGGTTCGTGACATGCTGGAGAATGAGGAGAAGAATGAGAATGCAGATTTTCATGTCAAGGAGGTTCAGTACATCCAGGCTGAAGTTAAGATTATAAAATGTCTTGTTGAGAATATTGTAGTAGACATTTCATTTAACCAGCTTGGAGGATTGTGCACCCTTTGTTTTCTTGAGGAGGTTGATAGTCTGATTAACCAAAATCATTTATTCAAGCGTAGCATTATTCTGATAAAAGCTTGGTGTTACTATGAGAGCCGTATACTTGGTGCCCACCATGGACTTATCTCAACTTATGCATTAGAAACTTTGGTTCTTTACATATTTCATGTTTTCAACAATTCCTTTGCTGGACCACTTGAGGTTTTGTATCGATTCTTGGAGTTCTTTAGTAAGTTTGATTGGGATAATTTTTGCGTAAGTCTATGGGGTCCAGTGCCAATTTGTTTACTCCCGGATGTGACAGCTGAACCTCCTCGAAAAGATGGAGGAGAGTTACTGCTGAGCAAATCATTTCTTGATGCCTGTAGCTCGGTTTATGCTGTTTTCCCTGGTAGTCAAGAAAATCAGGGGCAACCCTTTGTTTCCAAGCATTTCAATGTCATTGATCCTTTGCGTGTCAACAATAACCTTGGCCGCAGTGTCAGCAAAGGTAATTTCTTCAGGATACGTAGTGCCTTTGCATTTGGGGCTAAAAAATTGGCTAGGTTACTTGATTGTCCAAAGGATGAATTGTTTCTTGAAGTCAATCAGTTCTTTTTGAACACTTGGGACCGTCATGGAAGTGGGCAACGACCTGATGTTCCAAGCAATGACCTATGGCGTCTGAGGTTATCTAATCATGAACAATCACAGAGTTCTGAGAATCATAAAATTGATAATACCTCCAATCGCGAGTTTCATGCTGAAAGGGAACAATTTTCACATAGTGGTGTATCTCAGCATAGCAATGTTTCATCTGAAAACTCATCTAAAAATAGCGATGTTTCTACATTTTCCCGTCCTCATAGTCAAAAAAGTCATGTAAACCAAAATAAATCAAGGAACTTGGATCAAGCTCGAAGGGAAACTACTTCTACTCAAGTCGATAAAAGTCAGAGAAATGTGAAAACTGATAACCCAGTCAGTGATCTTCGTGGAAGGTTAATATTTGCCCGGACGCGTTCTAGCCCTGAGCTGACTGACTCGTACGGTGAAATTTCTTCCCAAGGAAGGCGTACAAGAACAACCGAAAGCATTAAAGGCCAGAATATTTTTGTAAAGTTGGAGAATGGTCGTAGGAAGAATTTTGAGTCAGATGTAGCTGCAAGAGTTGATGATGCATCCGGTAGGCACCTATCTCGTCAAGTTGTTGGTAGTGCCGCTGAATCGATCAGTAATCATGATGAACCAAACTCGGGTGTCATGGGTGAAGAGCATGGAGCTGTTGCCGGAGCAGGTGGAATGCAGATGATGAATCAGGAGGAGCAAGACCGTTTGAATATGATGCCATCTTCCACCGCTCAAGGTTTCAGTGGTCAGGCTCATATTCCAATGAATTTACCTCACCTACCATTCCCATTTCCACCTTCCCTTCTTGCGTCAATGGGATATGGTCAAAGAAATATGCCTAACATTCCCTTTATTGAGGCTCCTTGGGGTGCAAATATGCAATTTCATCAAGGTTTAGTCCCTTCACCATTTCCTCCATATTACCCTGGATACGGATTGGCCTCAAATCCTCAAGATTTAGTTGAAACTGGCAGCGAGAATTTCAGTTCTGTTGGAATGAATGCAGTGGAAGCTGATAATGATTTCTGGCACGAGCAGGAGAGAAGTTCTGCTAGTGGTGTTGAAGCCGATAATGGAAATTTGGAAATGCTTCCAGATGATAAACAACAGTCAACTTCAGGTAGTTATCATTTTGCCCCATCTTCTCGGGCAGGCAGCTCTAGTGGTTCTGCCAGAATTCACCAGAAGTTCACTAGAGAAAATCGAGGGTCAACGAGAGAAGAGCACGTTGATAATTTTCATTATCAAGATGGCCGGAGAAATGAGGTTTATTTGGATGATAGAATAGCAAATTCTGAATTACCAAGTGTACCACCTTCAAGCTCATTCAGAAGTAAGAGCCCTTCAGAAAGCTCGTGGGATGGATCGTCAGTCAAATCCTCAAAATCGACAAGGGATAAAAGGGGCAAGAAAAGTACTCCCTCAGTGCCTGCAGCTGCTTATGGTAAGGGTAAAAATGTCTCAGAAATTTCATCTAATCGAGCAGATGACGAAAACAAAGAGTGGACTCCTTTGTTGACTATGTCATCTGATATTTCTGACAGAAGTACTGAGCCTGCAACTGGTACGTCTATGCATGTTCCAAGGCATCAAATTTCTGGTTTTGAAGCTGCTCACACAAGTGGATCAGATTCTCCATTACCCATAGCTCCTGTGATTTTAGATCCTGGTTCTCGCCAAAGAGCTGTTGATAATTCTGGAGTTCTTCCGTTTGCATTTTATCCTACAGGTCCTCCAGTACCATTTGTTACAATGCTTCCCTATTATAATTTTCCGAGTGAGTCTTCTGAGACATCAACAAGCAACTTCAATGGGGAAGAAGGGGCGGAGAACAGTGATTCTGCTCTAAATTTTGATTCGTCCGAGGGATATGACCACTCTGAGGTGTCAAGCCCTTCAAATTCAATGGCAAGGGCGGGTATAGAATCATCTTACCACAAGCCTGATATTCTTAATAGTGACTTTGCTAGCCACTGGCAAAATTTGCAATTTGGGCGATTTTGTCAAAGTCCGTGTAATCCTCCTTCAATGATGTATCCTTCGCCTGTTATGGTGCCTCCTGTTTATTTGCAGGGTCGATATCCTTGGGATGGTCCTGGGAGACCTCCTGCATCTAACATGAATATCGCCACTCAGCTCATGAACTATGGGCCACGTCTTGTTCCCGTTCCTCCTCTACAATCAGTTTCAAATAGACCTGCAAATATTTACCAACGTTTTGTAGAAGATATGCCTCGGTATCGAAGTGGTACTGGAACCTACCTGCCAAATCCGGTTTCTGTTCGAGACCGCCATTCGACGAATACCAGAAGGGGAAACTACAACTATGATAGAAGTGATCATCATGGTGATAGAGAAGGGAACTGGAATACAAATTCAAAGTTGCGATCATCCGGGCGTGGCCATAATCGCAACCAAGGTGAGAAGCCAATCTCAAAATCGGAGCGGTTGGCAACTGGTGAGAGCCGTGCTGAGAGGCCATGGAGTACACACAGACACGACTCGTTTATTCCTCACCAGAACGGTCCAGTCCGTGGAAATTCCTCTCAGAACAGTCACGGGAATGTAGCATATGGAATGTACTCTATACCTGGCGTGAACCCTGGTGGCGCATCATCAAATGGACCAACAATGCCATCTGTTGTTATGTTGTATCCTTACGATCATAATGCTGGCTACAGTTCACCAGCAGAGCAGCTAGAGTTCGGGTCATTGGGACCAATGGGTTTCTCGGGTGCCAATGAACTACCACAGCCAAATGAGGGAAGTCGATCTGGTAATGGAACACTTGAAGAGCAAAGGTTTCATGGTGGCCCTGCTCAACGATCTTCACCGGATCAACCCTCTTCACCCCATGTCTCAAGGGGCCCTGATTCTAATGTGAGATAA 3996 0.4359 MGEHEEWAQPQSGLLPNGLLPNEAASVIQVLDSERWAKAEQRTAELIACIQPNSPSEQRRNAVAEYVQKLITKCFPCQVFTFGSVPLKTYLPDGDIDLTAFCKNQSLKDNWAHQVRDMLENEEKNENADFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDSLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPICLLPDVTAEPPRKDGGELLLSKSFLDACSSVYAVFPGSQENQGQPFVSKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKKLARLLDCPKDELFLEVNQFFLNTWDRHGSGQRPDVPSNDLWRLRLSNHEQSQSSENHKIDNTSNREFHAEREQFSHSGVSQHSNVSSENSSKNSDVSTFSRPHSQKSHVNQNKSRNLDQARRETTSTQVDKSQRNVKTDNPVSDLRGRLIFARTRSSPELTDSYGEISSQGRRTRTTESIKGQNIFVKLENGRRKNFESDVAARVDDASGRHLSRQVVGSAAESISNHDEPNSGVMGEEHGAVAGAGGMQMMNQEEQDRLNMMPSSTAQGFSGQAHIPMNLPHLPFPFPPSLLASMGYGQRNMPNIPFIEAPWGANMQFHQGLVPSPFPPYYPGYGLASNPQDLVETGSENFSSVGMNAVEADNDFWHEQERSSASGVEADNGNLEMLPDDKQQSTSGSYHFAPSSRAGSSSGSARIHQKFTRENRGSTREEHVDNFHYQDGRRNEVYLDDRIANSELPSVPPSSSFRSKSPSESSWDGSSVKSSKSTRDKRGKKSTPSVPAAAYGKGKNVSEISSNRADDENKEWTPLLTMSSDISDRSTEPATGTSMHVPRHQISGFEAAHTSGSDSPLPIAPVILDPGSRQRAVDNSGVLPFAFYPTGPPVPFVTMLPYYNFPSESSETSTSNFNGEEGAENSDSALNFDSSEGYDHSEVSSPSNSMARAGIESSYHKPDILNSDFASHWQNLQFGRFCQSPCNPPSMMYPSPVMVPPVYLQGRYPWDGPGRPPASNMNIATQLMNYGPRLVPVPPLQSVSNRPANIYQRFVEDMPRYRSGTGTYLPNPVSVRDRHSTNTRRGNYNYDRSDHHGDREGNWNTNSKLRSSGRGHNRNQGEKPISKSERLATGESRAERPWSTHRHDSFIPHQNGPVRGNSSQNSHGNVAYGMYSIPGVNPGGASSNGPTMPSVVMLYPYDHNAGYSSPAEQLEFGSLGPMGFSGANELPQPNEGSRSGNGTLEEQRFHGGPAQRSSPDQPSSPHVSRGPDSNVR 1331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01014 1331 MobiDBLite consensus disorder prediction 1116 1224 - -
Trre15g01014 1331 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Trre15g01014 1331 MobiDBLite consensus disorder prediction 1309 1331 - -
Trre15g01014 1331 MobiDBLite consensus disorder prediction 1170 1202 - -
Trre15g01014 1331 MobiDBLite consensus disorder prediction 964 1009 - -
Trre15g01014 1331 MobiDBLite consensus disorder prediction 764 788 - -
Trre15g01014 1331 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 16 1322 - -
Trre15g01014 1331 MobiDBLite consensus disorder prediction 801 894 - -
Trre15g01014 1331 MobiDBLite consensus disorder prediction 872 894 - -
Trre15g01014 1331 MobiDBLite consensus disorder prediction 1285 1299 - -
Trre15g01014 1331 MobiDBLite consensus disorder prediction 1210 1224 - -
Trre15g01014 1331 Gene3D - 162 358 - -
Trre15g01014 1331 MobiDBLite consensus disorder prediction 803 828 - -
Trre15g01014 1331 MobiDBLite consensus disorder prediction 716 788 - -
Trre15g01014 1331 MobiDBLite consensus disorder prediction 1133 1158 - -
Trre15g01014 1331 FunFam PAP/OAS1 substrate-binding domain superfamily 162 358 - -
Trre15g01014 1331 MobiDBLite consensus disorder prediction 733 763 - -
Trre15g01014 1331 SUPERFAMILY Nucleotidyltransferase 22 201 IPR043519 -
Trre15g01014 1331 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 353 - -
Trre15g01014 1331 CDD NT_PAP_TUTase 59 166 - -
Trre15g01014 1331 MobiDBLite consensus disorder prediction 421 459 - -
Trre15g01014 1331 MobiDBLite consensus disorder prediction 417 487 - -
Trre15g01014 1331 MobiDBLite consensus disorder prediction 1273 1331 - -
Trre15g01014 1331 FunFam PAP/OAS1 substrate-binding domain superfamily 52 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01014 Trre-Chr15 7931166 7938226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01014 - - gmx:100809742 2035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01014 15 7931166 7938226 Trre15g01014 15 7931166 7938226 ECH