Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01009 ATGAAGAACTTGAAGAGTACCGAAGAATTGCAGTCATCAACTCAAGCTTCTCACGAGCCCAAGAGTGAACAACCTAACAATCACACAACTGATGCTCCCGTCGCGGACTCAGGATCAGCATCTGCTTCAAGCAATGATAGCAAAAAGGTTTCACGGCAGGATATTGAGCTTGTCCAGAATTTAATAGAAAGGTGTTTGCAATTATATATGAATAAAGATGAAGTGGTTAAAACACTACTGACTCGGGCAAAGATAGATCCCGGATTTACAACTCTTGTGTGGCAGAAGTTGGAAGAAGAGAATGCTGATTTCTTCAGGGCTTACTATGTTAGACTAAAGTTGAAAAAGCAGATACTTTTATTCAATCATTTACTCGAGCATCAGTATCATCTCATGAAGTGTCCTATGCCACCAAAGGTTCCATTGGCTCCAATACAGAATGGAATCCATCCTATGCCTGTCAACAATCTACCTATGGGATATCCAGTTCTACAGCAGCATCCTATTCCAGCAGCAGGTCAGCCTCATATTGATTCCATGGGTATGTCAAGTTGTCATGTGGTTAATGGAGTCCCTGCACCGAGCAACTTTCATCCCATTAGGATGAATTCTGGGAATGATATGGTGATGGACCACAATGCTTCTGATATGGCCCCTATTATTCCACAAAACGGTACAATGTCTTCCGTCTCAGAAATGCCAGTGAGTCCGACATCAGTAGCATCCAGCGGACATTTCCCTTTCACTGCATCAGAAATATCAGGAATGGGAACAGATGCATCAGTTCTTGATTCAGCATTTACATCTGATGTGGTAAGTTCAGTAGGACTACAGCTTGCACCAGATGGCGGAAACGGAATTTCTAGATCACTTGATCAAATTCAGTGGAATTTTAGCCTATCAGATTTAACCGCAGATTTGCCAAACTTGGGAGATCTAGGAGCTTTGGGAAACTATCCGGGTTCGCCATTTTTGCCATCTGATTCAGACATGTTGCTTGAATCTCCAGATCAACAGGATATAGTGGATGACTTCTTTGTTAATTCTGAGCCTCCATGCTCTCAATCCGACGAGGAAAAACCTAACACTTAA 1092 0.424 MKNLKSTEELQSSTQASHEPKSEQPNNHTTDAPVADSGSASASSNDSKKVSRQDIELVQNLIERCLQLYMNKDEVVKTLLTRAKIDPGFTTLVWQKLEEENADFFRAYYVRLKLKKQILLFNHLLEHQYHLMKCPMPPKVPLAPIQNGIHPMPVNNLPMGYPVLQQHPIPAAGQPHIDSMGMSSCHVVNGVPAPSNFHPIRMNSGNDMVMDHNASDMAPIIPQNGTMSSVSEMPVSPTSVASSGHFPFTASEISGMGTDASVLDSAFTSDVVSSVGLQLAPDGGNGISRSLDQIQWNFSLSDLTADLPNLGDLGALGNYPGSPFLPSDSDMLLESPDQQDIVDDFFVNSEPPCSQSDEEKPNT 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01009 363 Pfam Plant protein 1589 of unknown function (A_thal_3526) 58 109 IPR006476 -
Trre15g01009 363 PANTHER OS02G0137100 PROTEIN 45 310 IPR006476 -
Trre15g01009 363 MobiDBLite consensus disorder prediction 1 49 - -
Trre15g01009 363 NCBIfam TIGR01589 domain 55 111 IPR006476 -
Trre15g01009 363 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01009 Trre-Chr15 7867749 7872205 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01009 - - psat:127076072 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01009 15 7867749 7872205 Trre15g01009 15 7867749 7872205 ECH