Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01001 ATGAAAAAGGCACTCAATCATGCTGCTTCCTCCACCGGAGAACTTCCACCGCCGGCAAAACGAATCCGAAGAACCAAAACCATCTGCTGTTGCAGCTCTCCTTGTCCTCCTTTTCTCTCCGCTCATTCCACTTTCTCATGGTTCGACGAGGATATTTGGACTGAGATTGCGAAGTTTCTGGATGGAAAATCTCTAATAATGCTGGCAGCTACAAACCGATGGTTCCACCGTGCTATCATGGATGATGTTATTTGGAAGTTTGTGTGTCTGCGTGATCTTCAAGTTCCATCTCCGCCATCTGTGGCATTCAAGTGGAGCAAGCTGTACACTTCAGCCTTTGATGGGAGCCACTCCTACAAGTTCCGTCAGCAGGAGAAACACATTGACTGGATGCGTATTGGTGCTTTTTTCTTTGATTCTTCAGTAGCCCTCCTGACAGAGAGGCTGAATTTTCCTGAGGAGTTAAAGAAAGAAGAAAGCTTGGAAAAGATGTTGCAGTCTCACGGTTGTTGCTTTCTAGACAACATTAAACCTGGAATCTGGATAGCTGATCTGCAGCTTGTGCGATGCCCGGTTTGTGACCTCAATACTTGCGATGGAACAATGCAGACATTAGACGCAAGGCATATAGAACTATTCCTCTGTGAAGGTTACCAAAATGGGAGCTGGGAGTATGAGGTTGTCGGATCTCATGATGTCAAGAAACGAGCAGATGGGGCTGCTGGCTCCATTTTTGACGTCAAACACCTGGAGAGTTCTTCTACTGCTGCGGTATTCGATTACAAGTCTTGGATTGGGAAAGATAATGACTGGCAACCCAAGGCCATGATTGCTTTCCATGCAGTAGCTGTGAACACTAATTTACAAGAAAATGAAGGTATTCATGTGAAATACCAAGCTATGAGGGCAGGACCTGATGGAGAAGTTGTTTCCATTAGAATCTCTCAGCAGCTTCTGTGA 960 0.4562 MKKALNHAASSTGELPPPAKRIRRTKTICCCSSPCPPFLSAHSTFSWFDEDIWTEIAKFLDGKSLIMLAATNRWFHRAIMDDVIWKFVCLRDLQVPSPPSVAFKWSKLYTSAFDGSHSYKFRQQEKHIDWMRIGAFFFDSSVALLTERLNFPEELKKEESLEKMLQSHGCCFLDNIKPGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLCEGYQNGSWEYEVVGSHDVKKRADGAAGSIFDVKHLESSSTAAVFDYKSWIGKDNDWQPKAMIAFHAVAVNTNLQENEGIHVKYQAMRAGPDGEVVSIRISQQLL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01001 319 Gene3D - 38 126 - -
Trre15g01001 319 PANTHER F-BOX PROTEIN RMF 18 319 - -
Trre15g01001 319 SUPERFAMILY F-box domain 42 108 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01001 Trre-Chr15 7837606 7841500 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01001 - - gmx:100797890 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01001 15 7837606 7841500 Trre15g01001 15 7837606 7841500 ECH