Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00988 ATGGAAATTCTCAACTTTTCAACCTCAAAAACTATTACATACCCATTTTTCTGTAACCCCAAAACTCTATACTCATCAAACTGTAACACCCCATTTCACAGAAACACTTTCCATTTATATCTAACAGCTTCTACTTCAAGAAAGTTTCAAACTTTGGCTCATTTTGGAAGACCCACTAACCGTCGTAATTCACTGAGGAACAAGCTTCTTCATGATAATCAGGTACGTCTCAATCATATTCCTAATGACCCATCTTTTGTTTCTAGTAATAGTGTTGAAGAGAGTGATGTAAGTTTTCAAAGTGATGGTTTTGTTGAATTGGAAAAAGAAAAATCTAAACTTTTAGGTGAATCTGTTTTGTTGAATAAATTGGAGAATTGGGTTGATCAGTATAGGAAAGATATTGATTTTTGGGGTATTGGGTCTAGTCCTATATTTACTGTTTATGAAGATTCATTTGGTGGTGTTAAAAGGGTTTTAGTTGATGAAGATGAGATTTTGGAAAGAGTTAGGGTTCAGAGAGGTGGAAATGAAATTGAGGATTTATCTGAAGTGGAGAGTAAGATTTCGGAGGCTAAGAAGCTAGCTAGGGAGATGGAGAATGGTGATAATGTGATTGCGAGGGATAGTTCCGTGGCTAAGTTTGTGGTTCAAGGTGGGGAGGAGAAGAAGAGTGGTTTTGTTATGGCTGTTCGAGATTTTTTCGTTCAGCCTCGGTTGGTTCCGAAGCTTACGGGGGTTGGCGGAATAGTATTGTGTGTTTTGGTTGTAATGTTTGCTGTGAAGAAATCGTTTAGTTTCAGAGGTAAAAAGGTTGAGTATACAGAAATTGAGAAGAAAATGATGATGAGGAAGGTAAAGGCTAGAAAAGAGAAAGAGAGGTTGATGAAGGGTGCTGTTGAAGTTATTCATGAAACTACGGAGACACCGGCGGTGATAGGTGTGAAAAAGCCGAAGTTAGATAAGGAAGAGCTTAAGAATAATATTGTAAAAGCTAAGGATTCTTCTGATAAACTTGTAGTTCAGAATTCTTCTGATGAAAGGAGAACTGGATCTATGGATATGGACTATAAAGTTCGACAGATCAGAGAAATGGCTAGGCGGGCACGGGAAATTGAAGGAAGAGATCGTTCTCTGGGTAGTAAGGATATGGAAGTTGAAGACCTTTTGATTGGGAAATCCTCCGATGAGAGTGAAGTTATAAAAAAGAATAACAAACACGATAACAGTTTAAGTAATCATCAAAATGAAGTTGTAAGGAAAACAACAGATAGTGATGAAATTCTGCAAACAACTTCTGATGATATCACGGAGAACGTTGATAATTCAGTCGAGCATGAGGTAGTTCGTGATGATAGAGAAATTGATAAAGGGGAAATAGAAATCAATGAAAACACTATGACCCTAAAGGACAGCGAAGACAATAAATCGTCACGTACTCCTATTAATGGCTCGTTTATGACACATAAAAGTTCAGTGACCAATAAACCAAGGATCATTCGGTCTGTCAAGGAAGCTCAAGATTATCTTTCAAAGAAACACGACAAACAAAATCCTGATACAAAACCTCAAATTGAACTTGGAAAAGAAAACATCACTGATTCAAAGCCTTCCAAATTTGTTGATTTTAACAACAAGAAGCAACCAAATTCGGAGATGAATACATTCGTGTCCAGAAGTAATACATTAAATGGATCATCATATTCAAAGCCGGACATAAATGCCAGCGAAGATTCTAATCAGAAGGAAAGGAAAGTTGGCTCAACAAAGGACGAGTGCTTCACAGATTCTGGTATTGAACCTGTATTGGAAGACCTTCAAAAGTCCGAGACTACATTAGACCGTGAAGTTAACGGCATCGATACAGAGGCAAGTCTATCAACGGAGAAAAGCTTCCCTGAAGTTGAGCCAACAATTAAACCAATTAGAAGTGATGATGCTTTAAATATGATATCCAATTCTAAGCCTGACCTAAATCCAAGCGAAGATTCTGATCAGAGGGATAAGAAATTCGACCCGAAAAAGATTGACAACATCAAAGACTCTAATGTTGAACCTGGAGTGGAAAATCTTCAAAATTCTAAGACCAGTTCAGACCATAAAGTTAATGGTGATAGTAGAGAAACAAAATCATCTGCAAAGACAGAAAATTGGCTGGAGAAAAATTTCCATGAAGTTGAGCCCATAATTAAGCAAATTAGAGCTGGATTTAGAGATAACTACATGGTTGCAAAAGAGAGAGTTGATCAACCTTTAGATATACCAACTGAGATGGAATCACTTGGAGTTGATGAAGATAGCGGAGAACTTGACTGGATGCAGGATGATCATCTTAGAGACATTGTCTTTCGAGTCCGCGATAATGAATTATCTGGACGAGACCCGTTTTATTTGATGAATGACGAAGACAAAGAAGCTTTCCTTGGAGGTCTTGAGAAAAAAGTGATGAAAGAAAACAAAAAACTTTCTCACCTCCATGAATGGCTCCATTCAAATATCGAAAACATTGATTACGGAGCAGATGGCATTAGTATATATGATTCACCAGAGAAAATCATACCACGTTGGAAAGGACCCTCCGTGGACAAAATTCCCGAGTCTTTAAACCAATTCCTAGATAAAAAGTTAAAGCCGGCTTCCACCAAAAATTTGAACCATGTGAAGAAGGACGAGAAGGAATCAGCTAAAAAATCAGTTGATTCATCGTCAAAATCAAAGGTTGATAGTTCCACAGCACCGAAGAAGAAGTTAAAAAATCCAAAGACTGTTGTTGAAGGAAGTGATGGCTCTGTTAAAGCCGGCAAAAAATCAGGGAAGGAATATTGGCAGCACACAAAGAAATGGTCCCAAGAGTTTTTGGATTGTTACAATGCTGAAACAGACCCAGAAGTTAAGTCCATAATGAAGGATATGGGGAAGGACTTGGATCGCTGGATCACTGAAAAAGAAATGAAGGAAGCAGCTAATGTGATGAACAGATTACCGAATAAGAATAAAAGTTTCGTGGAAAAGAAACTCAACAAACTTAAAAGAGAGATGGAGTTGTTCGGACCGCAAGCAGTGGTTAGCAAATATCGTGAATATTCAGACGACAAGGAAGAAGATTACTTATGGTGGTTAGATCTTCCATATGTACTGTGCATTGAGGTATATACCGTCGAGGATGGAGAAGAAAGAATTGGACTTTATTCATTGGAGATGGCTCCAGATCTTGAATTGGAGCCTAAGCCATATCACGTGATTGCTTTCCAAGATCCTAGTGACTGCAAAAGTCTTTGTTACATAATTCAGGCTCATATGGAGATGCACGGAAGCGGCAATGCATTTGTCGTTGCACGGCCTCCTAAGGAAGCTTTTCGAGATGCTAAAGAAAATGGTTTTGGTGTTACTGTCATCAAAAAAGGAGAACTTCAGCTTAATATAGACGAACCAATAGAAGAAGTGGAGGAACAAATTACAGAGATTGGTAGCAAAATGTACCATGATAAGATTATGAAGGATCGATCCATCGATATAAACACGATAATGAAGGGTGTATTTGGTTTTAATCCCTCCGCCAAGAGGTAA 3567 0.381 MEILNFSTSKTITYPFFCNPKTLYSSNCNTPFHRNTFHLYLTASTSRKFQTLAHFGRPTNRRNSLRNKLLHDNQVRLNHIPNDPSFVSSNSVEESDVSFQSDGFVELEKEKSKLLGESVLLNKLENWVDQYRKDIDFWGIGSSPIFTVYEDSFGGVKRVLVDEDEILERVRVQRGGNEIEDLSEVESKISEAKKLAREMENGDNVIARDSSVAKFVVQGGEEKKSGFVMAVRDFFVQPRLVPKLTGVGGIVLCVLVVMFAVKKSFSFRGKKVEYTEIEKKMMMRKVKARKEKERLMKGAVEVIHETTETPAVIGVKKPKLDKEELKNNIVKAKDSSDKLVVQNSSDERRTGSMDMDYKVRQIREMARRAREIEGRDRSLGSKDMEVEDLLIGKSSDESEVIKKNNKHDNSLSNHQNEVVRKTTDSDEILQTTSDDITENVDNSVEHEVVRDDREIDKGEIEINENTMTLKDSEDNKSSRTPINGSFMTHKSSVTNKPRIIRSVKEAQDYLSKKHDKQNPDTKPQIELGKENITDSKPSKFVDFNNKKQPNSEMNTFVSRSNTLNGSSYSKPDINASEDSNQKERKVGSTKDECFTDSGIEPVLEDLQKSETTLDREVNGIDTEASLSTEKSFPEVEPTIKPIRSDDALNMISNSKPDLNPSEDSDQRDKKFDPKKIDNIKDSNVEPGVENLQNSKTSSDHKVNGDSRETKSSAKTENWLEKNFHEVEPIIKQIRAGFRDNYMVAKERVDQPLDIPTEMESLGVDEDSGELDWMQDDHLRDIVFRVRDNELSGRDPFYLMNDEDKEAFLGGLEKKVMKENKKLSHLHEWLHSNIENIDYGADGISIYDSPEKIIPRWKGPSVDKIPESLNQFLDKKLKPASTKNLNHVKKDEKESAKKSVDSSSKSKVDSSTAPKKKLKNPKTVVEGSDGSVKAGKKSGKEYWQHTKKWSQEFLDCYNAETDPEVKSIMKDMGKDLDRWITEKEMKEAANVMNRLPNKNKSFVEKKLNKLKREMELFGPQAVVSKYREYSDDKEEDYLWWLDLPYVLCIEVYTVEDGEERIGLYSLEMAPDLELEPKPYHVIAFQDPSDCKSLCYIIQAHMEMHGSGNAFVVARPPKEAFRDAKENGFGVTVIKKGELQLNIDEPIEEVEEQITEIGSKMYHDKIMKDRSIDINTIMKGVFGFNPSAKR 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00988 1188 MobiDBLite consensus disorder prediction 613 716 - -
Trre15g00988 1188 MobiDBLite consensus disorder prediction 685 699 - -
Trre15g00988 1188 Coils Coil 322 342 - -
Trre15g00988 1188 Coils Coil 182 202 - -
Trre15g00988 1188 MobiDBLite consensus disorder prediction 501 536 - -
Trre15g00988 1188 MobiDBLite consensus disorder prediction 879 936 - -
Trre15g00988 1188 MobiDBLite consensus disorder prediction 478 498 - -
Trre15g00988 1188 MobiDBLite consensus disorder prediction 660 682 - -
Trre15g00988 1188 MobiDBLite consensus disorder prediction 576 591 - -
Trre15g00988 1188 MobiDBLite consensus disorder prediction 879 922 - -
Trre15g00988 1188 MobiDBLite consensus disorder prediction 537 575 - -
Trre15g00988 1188 MobiDBLite consensus disorder prediction 467 598 - -
Trre15g00988 1188 MobiDBLite consensus disorder prediction 403 423 - -
Trre15g00988 1188 PANTHER EMBRYO DEFECTIVE 1703-RELATED 11 1181 - -
Trre15g00988 1188 MobiDBLite consensus disorder prediction 700 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00988 Trre-Chr15 7736995 7741636 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00988 - - adu:107463403 1318.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00988 15 7736995 7741636 Trre15g00988 15 7736995 7741636 ECH