Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00964 ATGGGGAGCAGCATCATAGCATGGAAGCAGCTTCTTCTCAATGCTATGGAATCTAACACTCACCTCAAACACTCTTCTTACATGCAACTCGCAACCGTAGGAACCAACGGAAAACCTTCAAATCGCACTGTCGTTTTCAGAGGATTCCAAGACAACACTGATAACATCCTAATTAACACCGATACCCGCACTCGCAAGATTGAAGAGCTCAAGCGTTGCTCCTCTGCTGAGATATGTTGGTATTTCACAGATTCCTGGGAGCAATTCCGGATAAATGGGAATGTAGATATCATCGATGGCACAAATCCTGATCCTCTAAAACTTCAGCAAAGAGAAAAATCCTGGTTTGCCAGTTCCGTGAGATCAAGGTCTCAATATTTGGGGCCAGAACCAGGACTTCCCCGTCTAAATGAACAAACACAGCCGGAAATATCATTGGATCCTTCTTTAGGTCCAGTTGATGCTTTTTGTCTTCTGATTCTAGAACCAGATCAGGTTGATTACTTGAATCTAAAGAGTAACCAAAGGCTAACATTCAGATCAAGTTTGAGTGCTGCATCAAAGAAAAGTTGGATTATGGAGAGGGTCAACCTTTGA 597 0.4288 MGSSIIAWKQLLLNAMESNTHLKHSSYMQLATVGTNGKPSNRTVVFRGFQDNTDNILINTDTRTRKIEELKRCSSAEICWYFTDSWEQFRINGNVDIIDGTNPDPLKLQQREKSWFASSVRSRSQYLGPEPGLPRLNEQTQPEISLDPSLGPVDAFCLLILEPDQVDYLNLKSNQRLTFRSSLSAASKKSWIMERVNL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00964 198 Pfam Pyridoxamine 5'-phosphate oxidase 7 98 IPR024624 GO:0010181
Trre15g00964 198 Gene3D - 3 197 IPR012349 -
Trre15g00964 198 PANTHER PYRIDOXINE-5-PHOSPHATE OXIDASE 7 197 IPR000659 GO:0004733|GO:0008615|GO:0010181
Trre15g00964 198 NCBIfam PPOX class probable FMN-dependent enzyme, alr4036 family 7 197 IPR024015 -
Trre15g00964 198 SUPERFAMILY FMN-binding split barrel 4 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00964 Trre-Chr15 7520138 7522398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00964 K00275 - gmx:100779815 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00964 15 7520138 7522398 Trre15g00964 15 7520138 7522398 ECH