Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00958 ATGGCGGATTTGATGGGATCACGGGCATACTGCTGCTTCAAGTGCCAAAACCTTGTTGCTTTCCATGATGATATTGTTTCCAAAGATTTTCAGGCAAGTAATGGAAGAGCTTTTCTATTTTCTCATGCTATGAACATATTTTTGGGACCTAAAGAAGATAGACAGCTTATGACTGGTCTTCACACAGTTGCTGATGTTTTTTGTTCTGATTGTGGTGAAGAACTTGGTTGGAAATACATTAAAGCTTATGAAGAAACACAGAAATATAAAGAAGGAAAATGTGTGCTTGAGAAGTTCAAGATAGTTTTGGGAAATGGGTAG 321 0.3738 MADLMGSRAYCCFKCQNLVAFHDDIVSKDFQASNGRAFLFSHAMNIFLGPKEDRQLMTGLHTVADVFCSDCGEELGWKYIKAYEETQKYKEGKCVLEKFKIVLGNG 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00958 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 7 102 IPR039058 -
Trre15g00958 106 ProSiteProfiles Yippee domain profile. 8 105 IPR034751 -
Trre15g00958 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 10 101 IPR004910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00958 Trre-Chr15 7450209 7451366 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00958 - - gmx:100788878 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00958 15 7450209 7451366 Trre15g00958 15 7450209 7451366 ECH