Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00929 ATGAAAACAGAGCATAACAATAACAAAAGACTTTCAGTTATTGTTACTATCATTAAATCAGCGGCGTATGTTATCCTTCTCTTGCTAACTTACACCTTAGGTTACTTATCGCATTCATTTTCAAACCTCTCAGTACCTCCGCCGATATTCTCACCACCGCCGTCGCCCCCGCCGCCTCCACCGCCGCAAATTTATTCTTCCGTTCTCCGTCTCTCCGTCGTCAACACAACCGAGCTCGAACCGTTCCAAGTCAAAACACACTGTGCCGATCCAATTCCGCCGGAAAACATTAGTCAGACAATCATCAACCACATCTTCAATGGAAACTCTCCGTTTTTCAACTTTCCGCCGCCTCACGCGGCAGCAATTCTTCGCCGGAGTAAAAAAGTCAAAGGATGGGGTTCAAACGGCGCTGTTTTTGAAAACTTGATTCGTAAAGTGAAGCCAAAAATCATTGTTGAAGTTGGAACTTTCCTTGGTGCTTCAGCGATTCACATGGCTGAGTTGACTCAACAACTCGGACTCAGAACTCAAATACTTTGCATAGATGATTTTCGAGGTTGGGCCGGGTTTAGAGACCAATTCAAAAACATAGCTATGTTAAACGGTGACGTTTTGCTTTATTATCAATTTCTTCAAAACGTTGTTACTTTTAATAAAACCGGTTCGATTTTACCGGTTCCGTTTTCAAGCAGTTCGGCTTTAATGAAGCTTTGTGAATGGGGTGTTTGGGCCGATTTGGTTGAAATTGATGCGGGTCATGATTTTTTATCGGCTTGGTCCGATATAAACCGGGGTTTTCGAATTCTTCGACCCGGTGGGGTTATTTTTGGGCATGATTATTTTACTGCTGCAGATAACAAAGGGGTTAGAAGAGCTGTTGATTTATTTGCCAAAATTCATGGTTTTAAGGTGAATATTGATGGTCAACATTGGGTTATATATACCACTGTACAATAA 960 0.4219 MKTEHNNNKRLSVIVTIIKSAAYVILLLLTYTLGYLSHSFSNLSVPPPIFSPPPSPPPPPPPQIYSSVLRLSVVNTTELEPFQVKTHCADPIPPENISQTIINHIFNGNSPFFNFPPPHAAAILRRSKKVKGWGSNGAVFENLIRKVKPKIIVEVGTFLGASAIHMAELTQQLGLRTQILCIDDFRGWAGFRDQFKNIAMLNGDVLLYYQFLQNVVTFNKTGSILPVPFSSSSALMKLCEWGVWADLVEIDAGHDFLSAWSDINRGFRILRPGGVIFGHDYFTAADNKGVRRAVDLFAKIHGFKVNIDGQHWVIYTTVQ 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00929 319 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 5 316 - -
Trre15g00929 319 Pfam Methyltransferase domain 153 281 - -
Trre15g00929 319 Gene3D Vaccinia Virus protein VP39 135 310 IPR029063 -
Trre15g00929 319 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 90 293 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00929 Trre-Chr15 7128481 7129440 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00929 - - gmx:100795196 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00929 15 7128481 7129440 Trre15g00929 15 7128481 7129440 ECH