Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00927 ATGCAGCAAACACCGCAAATGATTCCTATGATGCCTTCATTCTCACAAACAAACATAACCACGGAACAGATTCAAAAATATCTTGACGAAAACAAGAAGCTGATTCTGGCAATATTGGACAATCAAAATCTCGGAAAACTCGCAGAATGTGCCCAGTACCAAGCTCAGCTTCAGAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCGCAGCCACAAGCACCGGCCTTGCCACCACAGATGGCCCCGCACCCTGCGATGCAACAAGGATTCTATATGCAACATCCTCAAGCTGCAGTAATGGCTCAGCAACAAGGAATGTTCCCTCAAAAAATGCCAATGCAATTCGCTAATCCGCATCAAATGCAGGATCAACAACAACAGCAGCAGCAGCTACATCAGCAGGCTATGCAAGGTCAAATGGGGATTAGACCCGGAGGGATAAATAACGGCATGCATCAAATGCACAACGAAGCTGCTCTCGGAGGTAGCGGCAGTGGTGGTCCGAATGATGGACGTGGTGGTGGCGGTGGAAGCAAGAAAGATGCTACGGAAGCTGGCACAGCTGGTGGAGACGGTCAAGGAAGGGCTGCCGCCACCGCTGCGCATAACAGTGGTGATGCTTCCGAAGAGGCAAAGTGA 642 0.4922 MQQTPQMIPMMPSFSQTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPALPPQMAPHPAMQQGFYMQHPQAAVMAQQQGMFPQKMPMQFANPHQMQDQQQQQQQLHQQAMQGQMGIRPGGINNGMHQMHNEAALGGSGSGGPNDGRGGGGGSKKDATEAGTAGGDGQGRAAATAAHNSGDASEEAK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00927 213 MobiDBLite consensus disorder prediction 118 138 - -
Trre15g00927 213 Pfam SSXT protein (N-terminal region) 18 73 IPR007726 -
Trre15g00927 213 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 2 211 IPR044779 GO:0003713
Trre15g00927 213 MobiDBLite consensus disorder prediction 118 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00927 Trre-Chr15 7107283 7110368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00927 - - gmx:100804074 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00927 15 7107283 7110368 Trre15g00927 15 7107283 7110368 ECH