Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00921 ATGTTCTTCTTATGCTTTAAGGGTATGTCACACAAATCTTTCATTTCAATTCTTGTCCTTATTTTGTCCTCTGTTATTGTGCTATCTACACCCCCAGAAGATCCAATTAAATGTTCATCAAAAAACACAAGCTGCACAATCACAAATTCCTATGGAATGTTCCCTGATAGAACAATATGTCAAGCTTCTCAAGCTCTTTATCCAACTTCTGAACAAGAATTAATTTCAATGGTTGCATCAGCAAGTAGTAAAAAAACAAAAATCAAAGTTACTACACGTTACTCACATAGCATACCTAAATTGGTATGTCTTGATGATGATTCAAAAGGGGTATTAATAAGCACAAAATATCTCAACAAAGTAGTGAAAATTGATGTGAATGAAAAAACAATAACTGTTGAAAGTGGTGTAACATTGAAGGATTTAATCAATGAAGCTTCAAAAAATGGTTTGGTTTTACCATATACACCCTATTGGTATGGTTTAACAATTGGTGGATTAATAGGAACTGGTGCACATGGAAGCACATTGTGGAATAAGGGAAGTGCTGTTCATGATTATGTGATTGAGATTAGGATTGTTAGGCCTTCAGATTCTAAAGATGGTTATGCTAAACTTGAAATTCTTAATGAACAAAATAATGAAGATTTTGATGCTGCTAAAGTTTCACTTGGTGTTCTTGGTGTTATTTCACAGGTGACCCTAAAACTAGAACCAGTTTTCAAGCGATCAATCACTTATTTGGCAAAAAGTGATTCTGATTTAGGAGAACAAGTGAAGGCTATATATCGTGTTGATGACCGTGTTCCCTTAAATACGTCTGGCAATGGTCTTTATGAATTTATCCCTTTTCGTCCCACTCCTTCACTTGCACTTGCAGTCATAAGAACCACAGAAGATCTTGATGAATCCACCAAGGATGGTGATGGAAAGTGCAGACTTGCAAAATTAACAACAAATACTCTCCTCACTTCAGCTTATGGGCTTACAAACAATGGTATAATCTTTACTGGATACCCTGTAATTGGACTCCACAATCGTCTTCAATCATCTGGATCATGCTTAGATAGTCTTCAAGATTTAAAGATAACTGCATGTGCTTGGGACTCAAGAATAAAAGGAGAGTTTTTTCATCAAACCACATTTAGAGTTAGTTTATCTATTGTGAAAAACTTCATTGAAGATATACAAAAGCTAGTTCAATTAGAGCCTAAAGCATTATGTGGAATTGAACAATACAATGGAATTCTAATGCGTTATGTCACGGCTTCGAGTGCTTACTTAGGGAACCAAGAGGAAGCATTAGATTTCGATTTCACATATTATCGTAGCAAAGATCCAATGGCTCCTAGGCTTTATGAAGACATTATTGAAGAGATTGAACAAATAGGAATTTTTAAATATGGAGGGTTACCTCATTGGGGTAAGAATAGGAATTTAGCTTTTGAAGGTGTTTTTAAGAAGTATAAAAATGTTGGGAAATTTTTGAAGGTTAAAGAGAAATATGATTCACAAGGGCTTTTTTCTAGTACTTGGACCGATCAAATGCTTGGATTAAAAGAAGGTGTGACAATATTGAAAAATGGGTGTGCTTTAGAAGGTTTGTGTATTTGTTCACAAGATAGTCATTGCAATCCTAGTAAAGGGTACTTTTGTAGACCAGGTAAAGTTTACAAGGAGGCAAGGGTTTGTTCTAATGTGTGA 1704 0.3492 MFFLCFKGMSHKSFISILVLILSSVIVLSTPPEDPIKCSSKNTSCTITNSYGMFPDRTICQASQALYPTSEQELISMVASASSKKTKIKVTTRYSHSIPKLVCLDDDSKGVLISTKYLNKVVKIDVNEKTITVESGVTLKDLINEASKNGLVLPYTPYWYGLTIGGLIGTGAHGSTLWNKGSAVHDYVIEIRIVRPSDSKDGYAKLEILNEQNNEDFDAAKVSLGVLGVISQVTLKLEPVFKRSITYLAKSDSDLGEQVKAIYRVDDRVPLNTSGNGLYEFIPFRPTPSLALAVIRTTEDLDESTKDGDGKCRLAKLTTNTLLTSAYGLTNNGIIFTGYPVIGLHNRLQSSGSCLDSLQDLKITACAWDSRIKGEFFHQTTFRVSLSIVKNFIEDIQKLVQLEPKALCGIEQYNGILMRYVTASSAYLGNQEEALDFDFTYYRSKDPMAPRLYEDIIEEIEQIGIFKYGGLPHWGKNRNLAFEGVFKKYKNVGKFLKVKEKYDSQGLFSSTWTDQMLGLKEGVTILKNGCALEGLCICSQDSHCNPSKGYFCRPGKVYKEARVCSNV 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00921 567 Pfam FAD binding domain 65 196 IPR006094 GO:0050660
Trre15g00921 567 NCBIfam FAD-dependent oxidoreductase 31 564 IPR010030 -
Trre15g00921 567 PANTHER GULONOLACTONE OXIDASE 17 559 - -
Trre15g00921 567 Gene3D - 120 239 IPR016169 -
Trre15g00921 567 ProSiteProfiles PCMH-type FAD-binding domain profile. 58 240 IPR016166 GO:0071949
Trre15g00921 567 Pfam D-arabinono-1,4-lactone oxidase 415 515 IPR007173 GO:0003885|GO:0016020
Trre15g00921 567 SUPERFAMILY FAD-binding/transporter-associated domain-like 56 239 IPR036318 GO:0050660
Trre15g00921 567 FunFam L-gulonolactone oxidase 5 120 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00921 Trre-Chr15 7063218 7073604 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00921 K00103 - gmx:100790483 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00921 15 7063218 7073604 Trre15g00921 15 7063218 7073604 ECH