Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00899 ATGGCCTTAATCACTTCTTCTTCACTCACTATATCCTCTTCATCTAACCTTTTTGAATGCAAGGTTCCTTTTCAATCATTAGCTTCTTCTCCACAATGTGTGAGCCTTGCCACTCTTCCATCACTCCCTTTGTTGTCTCAAAATCATGCATTGAAGACCAATTCTCATTATCGAAAGATTAGTCGCGATGTTATGGTAATGGCAACAGGAGATGCACCAGCAGAAACTGATGTCCCTGAGTTTGTTAAGTCTCTTCAAGATGCTTGGGACAAAGTTGATGATAAATATGCAGTGGGTTCATTGGTTGTAGCTAGTGCCATTGATAGGCTTCCCTTGATTCCAGGGGTTCTTGAGTTAGTAGGAATTGGCTACACTGGGTGGTTTGCATACAAGAACCTAGTTTTCAAACCAGAAAGGGAAGAACTTGTACAGAAAGTAAAGGACACAGTTACTGAAATAATTGGGAGCAAATAA 474 0.4051 MALITSSSLTISSSSNLFECKVPFQSLASSPQCVSLATLPSLPLLSQNHALKTNSHYRKISRDVMVMATGDAPAETDVPEFVKSLQDAWDKVDDKYAVGSLVVASAIDRLPLIPGVLELVGIGYTGWFAYKNLVFKPEREELVQKVKDTVTEIIGSK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00899 157 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 101 155 IPR025564 -
Trre15g00899 157 PANTHER - 24 156 IPR033344 GO:0009579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00899 Trre-Chr15 6804776 6806304 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00899 - - aprc:113849332 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00899 15 6804776 6806304 Trre15g00899 15 6804776 6806304 ECH