Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00888 ATGAGTGAAGAGAATGAGAACGGTCAAGAAGTTCAAGAAAGTCGCCCAACTCCGCGCTTGAATGAAAGGATTCTGTCATCTATGTCAAGGAGATCAGTTGCTGCTCATCCTTGGCATGATCTTGAAATTGGACCTGAAGCACCCAATATTTTCAATTGTGTTGTAGAGATCACTAAAGGAAGTAAGGTTAAATATGAACTTGACAAAAAGACTGGAATGATTAAGGTTGATCGAATTCTGTATTCGTCAGTTGTTTATCCTCATAACTATGGTTTTATCCCTCGAACTCTTTGCGAAGACAATGATCCACTTGATGTCTTAGTTCTCATGCAGGAGCCGGTTCTTCCGGGTTGTTTCCTGCGAGCCCGGGCCATTGGACTAATGCCAATGATTGATCAGGGGGAGAAGGATGATAAAATCATCGCGGTATGCGCTGATGATCCAGAGTATAAGCACTATACTGACTATAAAGAACTTCAACCTCATCGCCTAATGGAAATTCGACGCTTCTTTGAAGACTACAAGAAAAATGAGAACAAGGAGGTCGCAGTTAATGAATTTTTGCCACCATCCACTGCTGTTGAAGCCATCCAACACTCAATGGATCTTTATGCAGAGTATATTCTGCATACATTGAGGAGATAG 645 0.4171 MSEENENGQEVQESRPTPRLNERILSSMSRRSVAAHPWHDLEIGPEAPNIFNCVVEITKGSKVKYELDKKTGMIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDYKELQPHRLMEIRRFFEDYKKNENKEVAVNEFLPPSTAVEAIQHSMDLYAEYILHTLRR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00888 214 Gene3D Inorganic pyrophosphatase 32 210 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Trre15g00888 214 PANTHER INORGANIC PYROPHOSPHATASE 6 214 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Trre15g00888 214 MobiDBLite consensus disorder prediction 1 22 - -
Trre15g00888 214 SUPERFAMILY Inorganic pyrophosphatase 30 210 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Trre15g00888 214 Pfam Inorganic pyrophosphatase 53 204 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Trre15g00888 214 FunFam Soluble inorganic pyrophosphatase 4 32 210 - -
Trre15g00888 214 CDD pyrophosphatase 49 202 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Trre15g00888 214 Hamap Inorganic pyrophosphatase [ppa]. 49 205 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Trre15g00888 214 ProSitePatterns Inorganic pyrophosphatase signature. 100 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00888 Trre-Chr15 6678347 6680478 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00888 K01507 - qsu:112036652 400.979