Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00878 ATGAATTTGAGTAAAAGATTGGTTTTTGACACCAATAGAAAAATGGGTCTGAAAAATTTCATGATTTTTGTAGTGATGGTTTCATGGTTTTGTTCAATCTCTAGTGTTTTAGCAGCAAAACAGAAGCAGAATCAGAAGCTGAGGTTTGATAAAAATGGAGAATTCAAGATATTGCAAGTGGCAGATATGCACTATGCAAATGGAAAAAACACACTTTGTTTGGATATTCTTCCTTCACAAAATGCTTCTTGTACTGATCTTAACACTACTGCTTTCATTCATAGGATGATCCTTGCTGAGAAGCCTAATCTTATTGTCTTCACTGGAGATAATATCTTTGGTAATGATTCCTCGGATTCGGCTAAATCAATGGATGCTGCATTTGCTCCTGCAATTGCATCAAACATTCCTTGGGTAGCTATTTTAGGGAACCATGACCAAGAAGGATCACTCTCTAGGGAAGGTGTGATGAAATATATTGTTGGAATGAAAAACACTTTAGCTAAACTCAATCCTCCCGAAGTACACATCATTGACGGTTTTGGGAACTATAACTTGGAAGTTGGTGGTGTTCAAGGTACTACTTTTGAAAACAAATCTGTTCTCAATCTATACTTTCTTGATAGTGGAGATTATTCCAAAGTTCCTGCGATTGGTGGTTATGATTGGATCAAGCCTTCACAACAACTTTGGTTCGAGCGAACGTCTGCAAAGCTTCGGAAAGCATACATAAAAGGACCAGTGCCTCAGAAAGAATCTGCTCCTGGTCTTGCATATTTTCACATCCCACTACCAGAATATGCAAGTTTTGATTCATCAAACTTCACAGGTGTGAAATTGGAACCGAGTGGCGCGAATGGCAATGGCATTAGTTCGGCTTCGGTGAATTCTGGTTTCTTCACAACCTTGGTTGGAGCAGGAGATGTGAAGGCCGTTTTCGTTGGCCATGATCACCTCAATGATTTCTGCGGCAAGCTAATGGATATACAACTTTGTTATGCTGGAGGTTTTGGATACCATGCTTACGGAAAGGCTGGATGGTCTAGGAGAGCAAGAGTCGTGGTTGCTAGCTTGGAGAAGACGGACAAGGGAAGTTGGGGAGATGTCAAGTCGATTAAATCATGGAAACGCCTCGATGATCAGCATCTCACTGGAATTGATGGTGAGCTCCTATGGAGCAAGAGCTTTCACGATTCTGAAATGCTTGATTTGAAGGCTCAGATGGTGCTAAAACGGGAAGAGAAGAACACAATCACTAATTTGCACTTAAGTTCATAA 1278 0.4053 MNLSKRLVFDTNRKMGLKNFMIFVVMVSWFCSISSVLAAKQKQNQKLRFDKNGEFKILQVADMHYANGKNTLCLDILPSQNASCTDLNTTAFIHRMILAEKPNLIVFTGDNIFGNDSSDSAKSMDAAFAPAIASNIPWVAILGNHDQEGSLSREGVMKYIVGMKNTLAKLNPPEVHIIDGFGNYNLEVGGVQGTTFENKSVLNLYFLDSGDYSKVPAIGGYDWIKPSQQLWFERTSAKLRKAYIKGPVPQKESAPGLAYFHIPLPEYASFDSSNFTGVKLEPSGANGNGISSASVNSGFFTTLVGAGDVKAVFVGHDHLNDFCGKLMDIQLCYAGGFGYHAYGKAGWSRRARVVVASLEKTDKGSWGDVKSIKSWKRLDDQHLTGIDGELLWSKSFHDSEMLDLKAQMVLKREEKNTITNLHLSS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00878 425 CDD MPP_Dcr2 53 343 - -
Trre15g00878 425 Gene3D - 53 363 IPR029052 -
Trre15g00878 425 FunFam Probable inactive purple acid phosphatase 29 54 370 - -
Trre15g00878 425 SUPERFAMILY Metallo-dependent phosphatases 53 367 IPR029052 -
Trre15g00878 425 PIRSF Ptase_At2g46880 8 392 IPR011230 -
Trre15g00878 425 Pfam Calcineurin-like phosphoesterase 55 319 IPR004843 GO:0016787
Trre15g00878 425 PANTHER PHOSPHATASE DCR2-RELATED-RELATED 23 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00878 Trre-Chr15 6550954 6553717 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00878 - - tpra:123884645 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00878 15 6550954 6553717 Trre15g00878 15 6550954 6553717 ECH