Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00875 ATGTCTGCTCGATTGGTGAAGAAGATTCTGAACGAACAAAATCACTTTCCTCATCAACTCATCAAAGAAGAAGAGGAAGAAGAAGAAGATGAAAATTATGAAGAAGGTTCCACTGCACCTTCCACAATCAACCCCTTCGATCTTCTCAACGACGATGATTCTGAACCAGAACACCAGGGAGATGAGTCTGCTGATGAAACACCGACGAGACGTGATGATAAGGAGGGGACATCTTCAGTGAAAAGTTCTGCTCAGGTTTCAACATCAAATCCAAAATCAAAGAAAAAGAAGAATAAGAAGAAGAAAGGCAAGGATAATGCTGTTACCAGTAAAAGGGGAGGTGAAAAGGAATTGGACTCGATTTTAGAAGGTTTGGCTCTGAATGCGGATTCTTCAAGTGAGCAACATGTTTCTACAAAAGGAAAAGCAGTGAATGCTAAGGACAAAAGCAAATCTGTAAAGCAGGATGCTATGTCCATATTACTAGTGGATCCTAAACATTTGAGTGCCGAAAATGAGCTGATAAGGATATTTGGATCTAAGGTTGTGAAATCATTTGAGAATAGCAACAATCAACCGAGCAGTTCTAGGCAGATGCGAGGGGTGAGGAGAGTACGCTATAATCTTAAGAAGACTTTTCTTGTCACTCCAGCAAACACTTGGCTCCCATGTGATGATTCTTTGTCCATGCAATTTCTTGAAACAAAGAATGGATATAACTACTTTAGATATGTGCACTCGCCATCCTATTCCCAATATCAGAATTCCTTTGAAGCTGCCAAAGCAATTAATGACATAAATGGTATAGCAAGCATATTACAGCACCGTCCTTATCACATAGATTCCCTTCTAACAATGGCAGAATATTTCAAGGTAGTGGGTGAACAACAAATGTCTGCAGATACTATTGCCAGGTGTCTATATGCCCTTGAATGTGCGTGGCATCCCATGTTTACACCACTGCTGGGTAATTGCCAGTTGAAGTACAAACACGATGCAAACAAACCTATATTCATAGCCCTTTTCACTCACATGAAAAATTTGGACAGGCGTGGTTGTCATAGATCTGCTCTAGAAGTCTGCAAATTGTTGCTTTCACTAGATTCTGATGATCCCATGGGAGCTATTTTCTGCATTGACTACTTTGCTTTAAGGTCCGAGGAGTACGCATGGCTGGAAAAGTTTTCTGAAGCATATAAAAGTGATAACTCCATATGGTTGTTTCCAAATTTCTCTTTTTCTCTTGCCATTTGTCGGTTTTACCTTGAGCGTGAGGCCTCTAAAGATGCTTCTATAGATTCTAAAAAGTCTTCTTCCTCTGATCTTATGACACAAGCATTGATGCTTCATCCTTCGGTTATAAAGAAGCTAGTGGCAAAAGTACCATTGAAAGATCGTGCATGGACAGATATTCTCAAGCATGCCTTTTTCCGTTCCGATCAAACAGGAATTCCATCTCAAGATCACTTGATTAATATATATGTTGAGAGAAACTATCTTATATGGAGGCTTCCTGATCTACAAAAACTGCTAATTGCTGCTGCCAAACAAGTCATTGAAACCCTAGAAAGTAATAAGAGTGAAGTTAACGACTGGGCTTGTGTCAGAAAAGAAGCATTCTCATCTGAGAAAAATGAGTATGGACATTTGTTGGTGTCTAATTTCTCTGATTCAGTAACAGCAATTCCACCCGAACATCTGCAACAATTTATGGGCATTCCAAGGGCTGGGGGGGAGGCTATGCTGGACGAAAACCAATTTGCTAATCAGCATGGCAATGGACATCCTCCTCGTGGCGTTGCAAATAGAAACGCATTAGCTGTCTTGTTTGAGTCAATGTTACCGTGGGTTACTTATGAGGAAGGTGGACATGATGTTAACCAACCTGGTGACGATGAGCAAGACAATCAGTGA 1914 0.4054 MSARLVKKILNEQNHFPHQLIKEEEEEEEDENYEEGSTAPSTINPFDLLNDDDSEPEHQGDESADETPTRRDDKEGTSSVKSSAQVSTSNPKSKKKKNKKKKGKDNAVTSKRGGEKELDSILEGLALNADSSSEQHVSTKGKAVNAKDKSKSVKQDAMSILLVDPKHLSAENELIRIFGSKVVKSFENSNNQPSSSRQMRGVRRVRYNLKKTFLVTPANTWLPCDDSLSMQFLETKNGYNYFRYVHSPSYSQYQNSFEAAKAINDINGIASILQHRPYHIDSLLTMAEYFKVVGEQQMSADTIARCLYALECAWHPMFTPLLGNCQLKYKHDANKPIFIALFTHMKNLDRRGCHRSALEVCKLLLSLDSDDPMGAIFCIDYFALRSEEYAWLEKFSEAYKSDNSIWLFPNFSFSLAICRFYLEREASKDASIDSKKSSSSDLMTQALMLHPSVIKKLVAKVPLKDRAWTDILKHAFFRSDQTGIPSQDHLINIYVERNYLIWRLPDLQKLLIAAAKQVIETLESNKSEVNDWACVRKEAFSSEKNEYGHLLVSNFSDSVTAIPPEHLQQFMGIPRAGGEAMLDENQFANQHGNGHPPRGVANRNALAVLFESMLPWVTYEEGGHDVNQPGDDEQDNQ 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00875 637 MobiDBLite consensus disorder prediction 129 151 - -
Trre15g00875 637 PANTHER NULP1-RELATED 1 633 IPR006994 -
Trre15g00875 637 Pfam Transcriptional repressor TCF25 242 566 IPR006994 -
Trre15g00875 637 MobiDBLite consensus disorder prediction 1 115 - -
Trre15g00875 637 MobiDBLite consensus disorder prediction 92 106 - -
Trre15g00875 637 MobiDBLite consensus disorder prediction 61 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00875 Trre-Chr15 6536764 6541011 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00875 K24970 - gmx:100782875 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00875 15 6536764 6541011 Trre15g00875 15 6536764 6541011 ECH