Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00870 ATGAAGCAGAAAGAGTTGACTTTATTGCTATGTCTCATTTGGGCACTAACCATTCTCTATGGTGAAATGTTCTCTTACTGGCTTCCACCTCTCTTCACTTGTTCATGGCCCCATTTAAAGGTTCAAACAAAGAATGAGAGTTACCAAACTGATTATGTAAAAGTTGCTGTTATTGCAGATCCACAGCTCATGGACAAAACTTCTCTTCGTCTTCCTGACAAATCTCTTGCATTGGAGCTTGTGAAATTCTACACTGATTTAAACATGCGTAGATCATTCTTTTCATCGATCCTGCCTTTCAAACCTGATGTCATATTGTTTTTAGGCGATTACTTCGATGGAGGTCCTTTTTTATTAGATGAAGAATGGCAGGAGTCTTTCAACCGCTTTAAACATATCTTTGGTTTGAACGCACAAGGAAAATACGCGGACAAGGAAGTTTATTACATTCCTGGAAACCATGATATTGGTTACGAAACTCTTCATTATGCAAAGCCAGAGGTTATCAGACGCTACGAGGAAACATTTGGGATTAGAAACTACAGAATTGCAGTTGGAAAAGTGGATTTTATTGCTGTCGATGCACAAACTATTGATGGACACCGGCAAAAGAATCTGACTTCTCAAGTTTGGGAGTTTGTAAAGAATATCTCTGTAGATAACGTAGTTCGTCCAAGAGTCTTATTAACTCACATTCCTCTATATCGACCGGATGGTACTTATTGTGGCCCTGATCGTACTTCTCCAATTATTAATCAGAGGATACAACGCGCTGTGTATGATAAAAGTAATGATATTACGTATCAGAATTATGTTTTCGAGAAGACATCGAAGTATGTACTAGATACTATCAAACCTAAGCTTATTTTATCTGGCCATGATCATGATCAATGCACCATCACTCATCAATCTAAATCCGGGCCTGTAAAAGAGCACACTCTAGGTACCATAAGTTGGCAACAAGGAAATTTGTATCCTTCTTTCATGCTGTTATCTGTCGATAACTCAACTCTTCCAAATGCTTCCATTCCAGAAGAGCCTGTGTTGAGTCATCTATGTTATCTTCCAAAGCAATTACACATTTATATGTGGTATATTGTTCTATTTGTTCTCACCCTCCTTGCCCTCCTACTTTGGCCAACAAGCAGCACAAGTTTCTGGCATCAGTGTTGGAACTTGGCGGGTCATTTTAAACAACTAATAGCTTCCATGGTGTCTAGAAGCGAAACAAAAGAGAAGGACGAGGATGCCAACTATGAATACGAGATGATGTGGGATGCAGAAGGCTCAATGCATCTTGTAAAGAAACCCTTGAAGGCGTCCACTGTAAATTCAAATGAAAGAAGCTTAGGAGAAAGGGGTAATGTTGTAATGCGGCCAACTGCTAGAAAAAATACTGGTCAAGAAGCTGATTTCTCTGTGAATATGGGCATGGCTTCAACCACCGGACTTGATCCTCTAGCAAGAATACCTCCCAGAACAGGAAAATCAATGACAACAATTATAATCCAAAGATTAATACGCACACTACGAATGCTGACGGTTATTGCAGCCGTCAATGTTCCTCTTTACATGATGTTACTATTCAAGGATTGGATTGACAAATAA 1608 0.393 MKQKELTLLLCLIWALTILYGEMFSYWLPPLFTCSWPHLKVQTKNESYQTDYVKVAVIADPQLMDKTSLRLPDKSLALELVKFYTDLNMRRSFFSSILPFKPDVILFLGDYFDGGPFLLDEEWQESFNRFKHIFGLNAQGKYADKEVYYIPGNHDIGYETLHYAKPEVIRRYEETFGIRNYRIAVGKVDFIAVDAQTIDGHRQKNLTSQVWEFVKNISVDNVVRPRVLLTHIPLYRPDGTYCGPDRTSPIINQRIQRAVYDKSNDITYQNYVFEKTSKYVLDTIKPKLILSGHDHDQCTITHQSKSGPVKEHTLGTISWQQGNLYPSFMLLSVDNSTLPNASIPEEPVLSHLCYLPKQLHIYMWYIVLFVLTLLALLLWPTSSTSFWHQCWNLAGHFKQLIASMVSRSETKEKDEDANYEYEMMWDAEGSMHLVKKPLKASTVNSNERSLGERGNVVMRPTARKNTGQEADFSVNMGMASTTGLDPLARIPPRTGKSMTTIIIQRLIRTLRMLTVIAAVNVPLYMMLLFKDWIDK 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00870 535 CDD MPP_Cdc1_like 56 322 - -
Trre15g00870 535 Gene3D - 89 345 IPR029052 -
Trre15g00870 535 FunFam Calcineurin-like metallo-phosphoesterase superfamily protein 80 337 - -
Trre15g00870 535 PANTHER METALLO PHOSPHOESTERASE RELATED 1 460 IPR033308 GO:0006506
Trre15g00870 535 Pfam Calcineurin-like phosphoesterase 54 296 IPR004843 GO:0016787
Trre15g00870 535 SUPERFAMILY Metallo-dependent phosphatases 53 339 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00870 Trre-Chr15 6478984 6484278 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00870 K23362 - gmx:100776604 872.463