Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00864 ATGGATTCCTCTTCCGACGAAGAAGACGACCACCACCACCTCATCCACCAAAACTCAACAAAACCTCGAACTCCTCCCTCCATCACCACCACCTCCGCCGCAGCATTCCATGTCGAAGATATCACCTCGCGATTCCGGCGAACCAATTTCACCTTCCAGAAAAAGTACATTATCCCCATTCTCGTTATCCTCATCGTTGTTCTCCTCTTCTCAATCCCTAATCTCCGCCAACACTTCTCCACCGCTTCATTCATCTCCGATTCAATTTCCGATCGAATGAAGGAATCTGAATTACGCGCCATTTATCTCTTGCGTCAACAACAACTAGCTCTTTCCACCGCTTTCAACACTTCCAATTTCGAAGATCTGAAATCTGCACTTTTCAAGCAAATTTCAATCAACAATGAAATTCAACAGATTCTGTTGAATCCCCATAGAACAGGGAAATTGATTGATCCTGAATTCAATTTCGGAAAATTGAATTTTACTAGTGGAAATTATGATAGATGTAGAACAATTGATCAGAATTTATCAAAGAGAAAAACAATTGAATGGAACCCTAAAAATGGGAAATTTTTGGTTGCTATATGTGTTTCAGGTCAAATGTCAAACCATTTGATTTGTTTGGAAAAGCATATGTTTTTTGCTGCTCTTCTTAATAGGGTTTTGGTGATTCCAAGTTCTAAAGTTGATTATCAATATGATAGAGTTGTTGATATTGATCATATTAATAAATGTTTAGGGAAAAAAGTTGTTATGTCTTTTGATGAATTTTCTAATGTTAAGAAGAATCATTTGCATATTGATAAGTTTCTTTGTTATTTCGCGTTGCCGGAGCCTTGTTATTTGGATGATGAGAAGTTGAAGAAGTTGAATGGTTTGGGTTTTTCTATGAGTAAACCTAAGGCTGTTTGGGATGATGAGGATACTCGGAAACCAAAGAAGAAGACGGTTCAAGATGTTTTGTCGAAGTTTTCTTATGATGATGATGTTATGGCGATTGGTGATGTTTTTTATGCTGAAGTTGAACATGAATGGGTTATGCAACCGGGTGGACCGATTGCTCATCAATGCAAGACTCTGATTGAACCTAACAGGCTTATTTTGCTTACTGCTCAGCGGTTTATTCAGACATTCCTTGGAAGGAACTTCATTGCGTTGCATTTTCGGAGACACGGTTTTTTGAAATTCTGTAATGCTAAGAAACCAAGTTGCTTTTACCCCATACCTCAAGCAGCAGATTGCATCTTAAGAGTGATTGAAAGGGCGGATGCACCCATCATATATCTTTCTACTGATGCAGCTGAAAGTGAAACTGGTCTTCTTCAGAAACTGATTGTGCTGAATGGAAAGCCTGTTCCACTTGTAATTCGGCCGCCTCGGAATTCAGCAGAAAAGTGGGATGCTTTGTTATACAGGCATGGTATTGAGGGAGATTCACAGGTCGAAGCTATGTTGGACAAGACTATATGTGCCATGTCTAGTGTGTTCATTGGAGCACCGGGTTCCACTTTCACCGAAGACATCCTGCGACTGAGAAAGGACTGGGGATCAGCATCATTGTGTGATGAGTACCTTTGCCAAAGTGAAGAACCGAATATTGTAGCGGAAAGTGAATGA 1620 0.3994 MDSSSDEEDDHHHLIHQNSTKPRTPPSITTTSAAAFHVEDITSRFRRTNFTFQKKYIIPILVILIVVLLFSIPNLRQHFSTASFISDSISDRMKESELRAIYLLRQQQLALSTAFNTSNFEDLKSALFKQISINNEIQQILLNPHRTGKLIDPEFNFGKLNFTSGNYDRCRTIDQNLSKRKTIEWNPKNGKFLVAICVSGQMSNHLICLEKHMFFAALLNRVLVIPSSKVDYQYDRVVDIDHINKCLGKKVVMSFDEFSNVKKNHLHIDKFLCYFALPEPCYLDDEKLKKLNGLGFSMSKPKAVWDDEDTRKPKKKTVQDVLSKFSYDDDVMAIGDVFYAEVEHEWVMQPGGPIAHQCKTLIEPNRLILLTAQRFIQTFLGRNFIALHFRRHGFLKFCNAKKPSCFYPIPQAADCILRVIERADAPIIYLSTDAAESETGLLQKLIVLNGKPVPLVIRPPRNSAEKWDALLYRHGIEGDSQVEAMLDKTICAMSSVFIGAPGSTFTEDILRLRKDWGSASLCDEYLCQSEEPNIVAESE 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00864 539 Gene3D - 358 523 - -
Trre15g00864 539 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2 84 538 IPR045130 GO:0036066|GO:0046922
Trre15g00864 539 CDD O-FucT_like 355 513 - -
Trre15g00864 539 MobiDBLite consensus disorder prediction 1 17 - -
Trre15g00864 539 MobiDBLite consensus disorder prediction 1 27 - -
Trre15g00864 539 FunFam O-fucosyltransferase family protein 358 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00864 Trre-Chr15 6425616 6428770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00864 K03691 - gmx:100776069 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00864 15 6425616 6428770 Trre15g00864 15 6425616 6428770 ECH