Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00856 ATGAGAGAACCCAGAGATGCAACCAAAACCGATGCCAAAACCACTAAACCCGCATCATCTCCCGCTTCTTCCCCTCTCATTCTCGACATCGATGATTTCAAGGGAGATTTCTCTTTCGATGCTTTGTTTGGGAATTTGGTAAACGAGCTTCTTCCATCGTTCAAATTAGAAGACCTTGAAGCGGAAGGTGCTGATTCTCTACCGAATGGTCATCCTGTGAATAAATACTCTCAAGGGGCTACCAGTCCTTTGTTTCCTGAGGTTGAAACGCTCTTGTCTTTGTTCAAGAATTCTTCTAAGGAATTGCTTGAGCTACGTAAACAGATTGATGGAAGACTACAGGGTCTTAAGAAAGATGTTACTGTTCAAGACTCTAAGCATCGGAGGACACTAGCTGAGCTGGAGAAAGGTGTAGATGGGTTGTTTGAAAGCTTTGCGAGGTTGGATTCACGTATTTCAAGTGTTGGGCAGACAGCTGCAAAGATAGGAGATCATCTCCAGAGTGCAGATGCTCAGCGAGAAACTGCCAGTCAAACTATTGAGCTGATAAAATACTTAATGGAGTTCAATAGCAGCCCTGGTGATCTGATGGAGCTTTCTCCTCTCTTTTCTGATGATAGCCGTGTTGCTGAGGCTGCTTCAATTGCCCAAAAATTGCGGTCATTTGCTGAAGAAGATATTGGAAGACATGGTATAACTGTCCCATCTGCGGTGGGAAATGCAAATGCTAGCCGGGGATTAGAAGTTGCAGTTGCTAATTTACAGGAGTACTGTAATGAACTGGAGAATAGACTGCTTTCTCGGTTCGATGCAGCGTCCCAGAAAAGAGAATTGACCACAATGGCAGAATGTGCCAAAATTTTATCTCAGTTCAACAGGGGTACAAGTGCCATGCAACATTATGTGGCAACACGTCCAATGTTTATTGATGTGGAAGTAATGAATGCAGACACGAGGCTGGTTCTTGGTGACCAGGCTGCACAATCTAGTCCTAATAATGTTGCTCGTGGGCTTTCCTCCTTGTACAAAGAAATCACAGATACTGTCCGTAAAGAGGCTGCAACAATCACTGCTGTATTCCCTTCACCAAGTGAAGTTATGTCAATTTTAGTTCAGCGAGTTTTAGAGCAGCGAGTCACCGCTATTCTGGACAAACTATTAGTTAAACCATCTCTTGTAAATTTACCTTCCATGGAGGAAGGTGGGCTCCTATTCTATCTTCGAATGCTAGCAGTGGCGTATGAGAAGACCCAAGAACTTGCCAGAGATCTCCGAACTGTAGGATGCGGTGATTTAGACGTTGAGGGCCTGACAGAGTCCCTATTTTCAAATCACAAGGATGAATATCCTGAATATGAGCAGGCATCTCTTAGACAATTATATAAAGTGAAGATGGAAGAATTACGTGCTGAAAGCCAGATTTCTGATTCATCTGGTACAATTGGGCGCACAAAGGGTGCTACGGTAGCTTCTTCTCAGCAGCAAATATCTGTCACTGTTGTAACAGAGTTTGTGCGTTGGAATGAAGAAGCAATCACAAGATGTAATCTCTTTTCTTCCCAGCCTGCTACACTGGCAACCCATGTAAAAGCAGTGTTCACTTGCCTGCTAGACCAAGTTAGTCAATATATAGCAGAAGGTCTTGAACGGGCTAGAGACGGTTTGACTGAAGCAGCTAATTTGAGGGAAAGATTTGTGTTGGGTACTAGTGTTAGCCGTAGGGTGGCTGCTGCGGCCGCATCTGCTGCAGAAGCCGCGGCTGCAGCTGGTGAAAGCAGTTTTAGATCTTTCATGGTTGCTGTACAACGTTCGGGAAGCAGTGTAGCTATTATTCAACAATACTTTGCCAATTCAATATCTAGGCTTTTGCTTCCTGTGGATGGTGCACATGCTGCTGCTTGTGAAGAAATGGCTACAGCAATGTCCAGTGCAGAGGCTGCTGCTTACAAAGGATTACAACAATGTATTGAAACCGTCATGGCTGAGGTAGAGCGATTGCTTTCAGCTGAGCAAAAGGCTACAGATTATAAATCACCTGATGATGGAATGGCTCCTGACCACCGGCCAACTACTGCCTGCACAAGGGTTGTGGCTTATCTTTCGCGGGTGCTGGAGTCTGCATTCACTGCTTTAGAAGGTCTTAATAAACAAGCATTTTTGTCTGAATTGGGAAATCGCTTGCACAAGGTTTTGCTAAACCATTGGCAGAAATATACTTTCAATCCAAGTGGGGGATTGCGGCTGAAGCGTGACATTACTGAGTATGGGGAGTTTGTGCGTAGTTTCAATGCTCCTTCTGTTGACGAGAAATTTGAATTGTTGGGCATAATGGCCAATGTCTTTATTGTTGCTCCTGAGAGCCTTTCAACTTTGTTTGAGGGTACACCCAGCATTCGGAAAGATGCACAAAGATTTATTCAACTTCGGGAGGACTACAAGAGTGCCAAGCTTGCATCCAAATTGAGTTCCTTGTGGTCTTAA 2481 0.4438 MREPRDATKTDAKTTKPASSPASSPLILDIDDFKGDFSFDALFGNLVNELLPSFKLEDLEAEGADSLPNGHPVNKYSQGATSPLFPEVETLLSLFKNSSKELLELRKQIDGRLQGLKKDVTVQDSKHRRTLAELEKGVDGLFESFARLDSRISSVGQTAAKIGDHLQSADAQRETASQTIELIKYLMEFNSSPGDLMELSPLFSDDSRVAEAASIAQKLRSFAEEDIGRHGITVPSAVGNANASRGLEVAVANLQEYCNELENRLLSRFDAASQKRELTTMAECAKILSQFNRGTSAMQHYVATRPMFIDVEVMNADTRLVLGDQAAQSSPNNVARGLSSLYKEITDTVRKEAATITAVFPSPSEVMSILVQRVLEQRVTAILDKLLVKPSLVNLPSMEEGGLLFYLRMLAVAYEKTQELARDLRTVGCGDLDVEGLTESLFSNHKDEYPEYEQASLRQLYKVKMEELRAESQISDSSGTIGRTKGATVASSQQQISVTVVTEFVRWNEEAITRCNLFSSQPATLATHVKAVFTCLLDQVSQYIAEGLERARDGLTEAANLRERFVLGTSVSRRVAAAAASAAEAAAAAGESSFRSFMVAVQRSGSSVAIIQQYFANSISRLLLPVDGAHAAACEEMATAMSSAEAAAYKGLQQCIETVMAEVERLLSAEQKATDYKSPDDGMAPDHRPTTACTRVVAYLSRVLESAFTALEGLNKQAFLSELGNRLHKVLLNHWQKYTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKDAQRFIQLREDYKSAKLASKLSSLWS 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00856 826 Pfam Exocyst complex component Sec10 489 820 IPR009976 GO:0005737
Trre15g00856 826 Pfam Exocyst complex component Sec10 139 475 IPR009976 GO:0005737
Trre15g00856 826 Gene3D - 659 820 - -
Trre15g00856 826 Coils Coil 244 264 - -
Trre15g00856 826 PANTHER SEC10 26 815 IPR009976 GO:0005737
Trre15g00856 826 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00856 Trre-Chr15 6350842 6360704 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00856 K19984 - gmx:100820430 1380.16