Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00850 ATGCGGAAATCCGCTGCAGACAGATTCAGGTACCTTTTCAACCGTTCACTTGTTTTTGTTCGGAATCAACAACAAAATCAACAACATCGTCTTTCTCCTCTTCCCTTGTCTTCTTCTCCTTTTTCTTCAATGGCTTCTGATTCACCTTTCCCTGTTACCGCTCAAAATATTAACCCCCAGGTTCTGAAATGTCAGTACGCTGTTCGAGGAGAGATTGTTACACTTGCCCAGAATTTGCAAAAAGATTTGCAGGCCAATCCAGGCGCTCATTCGTTTGATGAGATAATTTACTGCAACATTGGAAATCCTCAGTCTCTTGGCCAGCAGCCAATTACTTTTTTCCGAGAGGTTCTTGCTTTATGTGACTATCCAGCTCTTTTGGACAAAAGTGAGACACAGGGTTTGTTCAGTGCTGATTCAATAGAGCGAGCTTGGCAGATTGTGGATCAGATTCCTGGGAGAGCAACTGGTGCCTATAGTCATAGTCAGGGTATTCAGGGTTTACGTGAAACAATAGCCGCTGGAATCGGAGAGCGTGATGGTTTTCCTTGTAATGCCGATGACATTTTCTTGACAGATGGTGCAAGCCCAGCAGTCCATATGATGATGCAATTACTTACCAGATCGGAAAAAGATGGTATTTTGTGTCCCATCCCTCAGTACCCTCTCTACTCAGCCTCAATTACCCTCCATGGTGGCCACCTGGTACCTTATTATCTAGATGAAGCAACTGGTTGGGGGCTAGAAATATCCGAACTCAAGAAGCAGTTGGAAGATGCCAAGTCCAAGGGCATCAATGTTAGGGCTTTAGTTGTTATAAATCCTGGCAATCCAACAGGGCAGGTTCTTGCTGAGGAAAATCAACGGGCTATAGTAGAATTTTGCAAGCAAGAAGGTTTGGTTCTTTTGGCTGATGAGGTATATCAAGAAAATGTTTATGTTCCCGAGAAGAAATTTCACTCTTTCAAGAAGGTATCTCGATCCATGGGATATGGCAACAATGATATCTGCTTAGTATCTTTTCAGTCTGTCTCCAAAGGTTATCATGGTGAGTGTGGAAAACGAGGAGGTTATATGGAGGTGACTGGGTTTTCTCCAGATGTGAGAGAACAGATTTATAAAGTGGCATCCGTGAATCTTTGTTCCAACATCACTGGTCAAATTCTTGCTAGTTTGATCATGAGTCCACCTAAGGTTGGAGACGAGTCCTATGAGTCGTTTATGGCTGAGAAGAATGCTATCTTAACTTCCCTCACTAAGCGTGCAAAGTCACTGGAAGAAGCTTTAAACAAATTAGAGGGTGTAACCTGCAACAAAGCAGAAGGGGCAATGTATCTGTTTCCTCGGATCCGCCTGCCCGAAAAAGCTATCAAAGCTGCAGAGGCTGAAAAGACAGCACCGGATGCCTTCTATTGCAAACGCTTACTTAATGCCACAGGAATTGTCGTCGTTCCTGGTTCTGGTTTTGGACAGGTACCTGGCACATGGCATTTTAGGTGCACCATATTGCCTCAAGAAGATAGGATTCCGGCCATCGTCACCCGCTTGACAGAGTTCCATGAAAAGTTCATGAACGAGTTTCGTGATTGA 1590 0.4409 MRKSAADRFRYLFNRSLVFVRNQQQNQQHRLSPLPLSSSPFSSMASDSPFPVTAQNINPQVLKCQYAVRGEIVTLAQNLQKDLQANPGAHSFDEIIYCNIGNPQSLGQQPITFFREVLALCDYPALLDKSETQGLFSADSIERAWQIVDQIPGRATGAYSHSQGIQGLRETIAAGIGERDGFPCNADDIFLTDGASPAVHMMMQLLTRSEKDGILCPIPQYPLYSASITLHGGHLVPYYLDEATGWGLEISELKKQLEDAKSKGINVRALVVINPGNPTGQVLAEENQRAIVEFCKQEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGNNDICLVSFQSVSKGYHGECGKRGGYMEVTGFSPDVREQIYKVASVNLCSNITGQILASLIMSPPKVGDESYESFMAEKNAILTSLTKRAKSLEEALNKLEGVTCNKAEGAMYLFPRIRLPEKAIKAAEAEKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDRIPAIVTRLTEFHEKFMNEFRD 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00850 529 Pfam Aminotransferase class I and II 154 503 IPR004839 GO:0009058|GO:0030170
Trre15g00850 529 Coils Coil 408 435 - -
Trre15g00850 529 PANTHER ALANINE AMINOTRANSFERASE 44 528 IPR045088 GO:0008483
Trre15g00850 529 FunFam Alanine aminotransferase 2 401 527 - -
Trre15g00850 529 FunFam Alanine aminotransferase 2 106 156 - -
Trre15g00850 529 SUPERFAMILY PLP-dependent transferases 54 523 IPR015424 -
Trre15g00850 529 FunFam alanine aminotransferase 2 157 403 - -
Trre15g00850 529 Gene3D - 157 403 IPR015421 GO:0003824
Trre15g00850 529 Gene3D Aspartate Aminotransferase, domain 1 55 527 IPR015422 GO:0003824
Trre15g00850 529 CDD AAT_like 142 518 - -
Trre15g00850 529 Gene3D - 106 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00850 Trre-Chr15 6303701 6309616 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00850 K00814 - gmx:100127413 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00850 15 6303701 6309616 Trre15g00850 15 6303701 6309616 ECH