Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00849 ATGTATGGTAGTAAAAACAAGAACATTAACAACAATAACCCTTTTGTTGATGATGATTTCATTGACCCTCTTTGTAAACTTAATCTAAAAGAAACATCTGAGTTTGTCAAATCTTTACCACTTCCAAATATCAATGCAGAAAACAGAAGATTCAGTAATGATTCTATAACACAAATAAGAAAACTAGAAGCTCCTTCTACACCTGGTAGACCACTTTTCAGCTTCAGTTCATCATCATCATCTTCTATTGTTGGAAGAAACAATCTTCCAAGAAAAAGTTTTCCATCTAAATGGGATGATGCTGAAAAATGGCTTATAAGCACTTCTTGTCATGACTCACCAGCTCATAACAATAACAACACTTTGAATTTGAAAGCTTCTTCATCTTCAGAATCTTCAAGCATTGGAGTAACAAGACAATGTGATAATAGCTTTAAGCAAAAAAGTGAAGATTTTTCAGAGAAATTAAAGGTCATTGAAGAAAAAGTGTTGTCTAAAACTGGTCCTAATTTTCAATGTTTTTCTTCAAGTTTGGACCACAATAACAGTGTTGGAGCTTTCAATGGGATTTCATGTCCAACAGACATAATACTAAAAGATAAATTCACAGACAGCATAGAACCAATTTTACCAAAATTCAGATATTCGGAACCGACAAAAGAAGGATTCTTATTCAAAAACCAAGCATGTGATTCAATGAATGATGCTTTCACAGAAGTGGTTCATGAAGTTAAACACAAAGATGCTGGCACTGAGATGACTCCATTAGGAAGTTCCACAACTTCAAGATGTCACACACCATTCAAGAGTTCGTCGCCTGCACGCCATAACACTCCGGCTAGTAGATCAGGACCGTTGGCATTATCTAACGCCGATTGCAACGATGTTATTCAGCTAGAAGAGTGTCATTTTGATAAACTGCAATATGGAACAACAAAGTATGATTTGGTTGCACCAAATTGGAGTTCAAGTGAAGAGGAAGAAAAGGAAATATCGAAAAGTTTGAGACATAATGCTAGTTTAAAAGCTGATTCTGATTGTATAGCTGCTACTTGGGAAGAAGAGGAGAAGAACAAGTGTTGTCTTAGGTATCAAAGAGAAGAAGCAAAAATCCAAGCTTGGATAAACCTCCAAAATGCTAAAGCAGAAGCTAGGTCAAAAAAACTTGAGGTGAAAATCCAAAAGATGAGATCAAACCTAGAAGAGAAGTTGATGAAGAGGATGTCAGTGGTTCATAGGAAAGCTGAAGAATGGAGAGAAACAGCAAGGCAACAGCATTTGGAGCAAATGGAAAAATCAACTCAACAAGCTAAAAAGATTATTCATAGGCATAGCTCACAATTTTCTAAGCACAATTCATGTGGATGCTTCCCTTGCAATAACAACTATTAA 1392 0.357 MYGSKNKNINNNNPFVDDDFIDPLCKLNLKETSEFVKSLPLPNINAENRRFSNDSITQIRKLEAPSTPGRPLFSFSSSSSSSIVGRNNLPRKSFPSKWDDAEKWLISTSCHDSPAHNNNNTLNLKASSSSESSSIGVTRQCDNSFKQKSEDFSEKLKVIEEKVLSKTGPNFQCFSSSLDHNNSVGAFNGISCPTDIILKDKFTDSIEPILPKFRYSEPTKEGFLFKNQACDSMNDAFTEVVHEVKHKDAGTEMTPLGSSTTSRCHTPFKSSSPARHNTPASRSGPLALSNADCNDVIQLEECHFDKLQYGTTKYDLVAPNWSSSEEEEKEISKSLRHNASLKADSDCIAATWEEEEKNKCCLRYQREEAKIQAWINLQNAKAEARSKKLEVKIQKMRSNLEEKLMKRMSVVHRKAEEWRETARQQHLEQMEKSTQQAKKIIHRHSSQFSKHNSCGCFPCNNNY 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00849 463 Coils Coil 379 406 - -
Trre15g00849 463 Pfam Remorin, C-terminal region 349 445 IPR005516 -
Trre15g00849 463 PANTHER OS02G0116800 PROTEIN 52 457 - -
Trre15g00849 463 MobiDBLite consensus disorder prediction 253 286 - -
Trre15g00849 463 MobiDBLite consensus disorder prediction 248 286 - -
Trre15g00849 463 CDD UDM1_RNF168_RNF169-like 383 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00849 Trre-Chr15 6295883 6300123 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00849 - - gmx:100776089 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00849 15 6295883 6300123 Trre15g00849 15 6295883 6300123 ECH