Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00847 ATGCGGAAGCTCGATTGTTTGTCGATGGATGCATTAGACAAGACCTTTTCTGAGCTTGTCAGCATTATTAAATCATGGATTCCCTGGCAATCTGAGCCAGCAAACGTGTCTCGCGATTTTTGGATGCCGGATCACAGTTGTAGAGTATGCTACGATTGTGATTCCCAATTCACCTTATTTAATCGCAGACACCATTGTCGTCTTTGTGGACGAATTTTCTGTTCCAAATGTACAACAAACTCAGTTCCTGCCCCATTTAGCAGCCAAAGGAATTTGTGGGACGAGTGGGAAAAGATTCGCGTATGCAATTTTTGTTACAAGCAATGGGAGGAGGGCGTAGTTTCTGTTGATAACAGTGGTCAGGTTTCTAATCTAGATCGTACAATGTCAGCTTCAAGTGTGGCTAGTAGTAAAACTAGTGCCACTGCTAATAGTAGTAATGTTACTCTTTGCTCCATGCCTTATTCAGTTGGTTCTTATCAACAAATACAACCGGGTTCATGCGTGAACAAACTATATCAATCTCCTAAGAGGGGAAAAGAAACTGATAGGGAAGGTTTATCATCCTTAGGAGGGAGGAATATTGACCTTGTAGAAGACCTAGGAGACCCATTACCGAAGCAATGCGGGTTCTCCATGAGCAGGAGTGATGATGATGAGGATGAGTATGGTGTATATCCGTCGGATTCTGATACGAGGCAATATCCTCAAGTGAATAGCTACTATGGACAAGCTGTGCTTGATGGGATAAGCAACATTGATGGCTCACAGAAAGTGCATCCTGATGGAGAAAATATTGATGCAAACCTCTCTTCAAATTACAATTTTGATGCAGGGGGTTTGGAAGGAACACCAGTTATTGTAAAAAATGAAGATGAGCCTGATATCTGTGATGAAAATGAAGCACCTTCCTCGTTATATGTTTCAGAGGATGTTGATGCTGAACCTGTTGATTTTGAAAATAATGGACTCCTGTGGCTTCCTCCAGAACCAGAAGATGAAGAAGATGATCGGGAGGCTATTTTGTTTGATGACGACGACGATAATGATGGGCGTGCCACTGGAGAGTTTGGTTATCTGCGCAATTCAAGTAGTTTTGGAAGTGGGGAGTATCGACACAAAGATAGGTCAAATGAGGAGCACAAGAAGGTAATGAAGAATGTAGTTGATGGACATTTTAGGGCTTTGGTATCACAGCTGTTACAGGTTGAGAACCTACCAGTTGAAGACAATAACAAAAACAGTTGGTTGGAAATAATCATATCTTTGTCATGGGAAGCTGCTAATTTACTAAAACCAGATATGAGCAAAGGCGGAGGGATGGACCCGGCTGGTTATTCGAAAGTCAAATGCATAGCATGTGGGAGCCGCATTGAAAGTGTGGTGGTTAAAGGAGTTGTTTGTAAGAAAAATGTGGCTCATCGGCGAATGACGTCAAAAGTGGATAAACCTCGCATATTGATTCTTGGAGGGGCTCTTGAATATCAGCGTGTTACCAATCTCTTGTCTAGTGTAGATACCCTATTGCAGCAGGAAATGGACCATCTGAAAATGGCAGTGGCAAGGATAGCTTCACACAAACCAGATATCCTTCTGGTAGAGAAATCAGTTTCTCGATATGCACAGGAGTATCTTCTTGCAAAAGACATAACACTGGTTCTGAATGTAAAGAGACCTCTTCTAGAGCGCATAGCACGTTGCACAGGCACTCAAATAGTGCCTTCAATTGATCATCTTTCATCACAAAAGTGGGGTTACTGTGAAATATTTCATGTTGAAAAGTTTCCCGAAGACCTAACTAGTGTTAGTCAGGGTGCGAAAAAAACAGTGAAAACATTGATGTTTTTTGAAGGTTGCCCAAAACCATTAGGTTGCACAATTTTACTTAGAGGAGCTGACATGGATGAATTGAAAAAGGTAAAGCATGTGGTTCAGTATGCAGTTTTTGCAGCTTACCATTTGGCGATGGAGACATCATTTCTTGCTGATGAAGGAGTCTCCCTACCAGAAATTCCATTGAACAGTCTGGCCCTTCCAAATAAGTCATCATCTATTCAAAGGTCCATCTCAACAGTTCCTGGTTTTACTGTTCCTGGCAATGAAAAACCCGAGGTTCTTGAACCTGACACTGGACCACGGAGAACCAAAAGTGTCACAGTTGTTGAACTAGCCTCATCAATTTGCAATACAGGATCATTATCTAATGGTTCTTCTCGATCACTGCCACCTGGAACAACTCTTGATAATTCAAGTACCTTGTACTCCTCCATTGTTGGCTCAAGAGATGGCATTCCCGAGTTGTACCATAATAAGCTTCTTTCCAAACAACCTCTGGTAAAAGAAACTTTTGTGGTGGATAACACTCCGATAGTCATGGATGACCCCTTTGTAAATGATTCTGATACTGCAGAGAAAATATATCAAGGCATTTTAGCGGGAAAATCTCAAAATAATCATAACCAAAAACCTCAAAATGATCATAGCCAAATCTACGCAAATCAATTAAGTGGTTCAGAGTCGTTATCTCCAAATCATGCTCAAAACCATATTGAGAAGATTGTAATCAGAAATGAAGAACCAGTTCCTCAAAAAGAAGAGTTTCCTCCATCACCCTCTGACCATCAAAGCATTTTGGTGTCGTTGTCTTCACGGTGTGTATGGAAGGGAACTGTGTGTGAGAGGTCCCATCTATTTCGAATTAAATACTATGGAAGCTTTGACAAACCATTGGGTCGGTTTCTGCGAGACCATTTATTTGATCAGAGTTATCGATGCCATTCTTGTGATATGCCATCAGAAGCACATGTGCATTGTTATACTCATCGGCAGGGAACACTTACCATATCAGTCAAGAAACTACCAGAAATCATCCTTCCTGGTGAAAGAGAGGGAAAGATTTGGATGTGGCACAGGTGCTTGCGATGTCCAAGAATCAGTGGCTTTCCTCCTGCTACACAAAGAATAGTAATGTCTGATGCTGCTTGGGGTTTATCATTTGGAAAGTTTTTGGAGCTCAGTTTTTCAAACCATGCTGCAGCCAGCAGGGTGGCAAGCTGTGGCCATTCTCTACACAGAGACTGTCTTCGTTTTTATGGATTCGGAAAAATGGTTGCATGTTTTCGATATGCATCCATTGATGTTCACTCAGTCTACCTTCCCCCACACAAACTGATTTTTGATTATGGGAATGAGGATTGGATAAAAAAAGAATCAGATGAGATGGTCAACCGGGCGGAGCTTTTATTCTCCGAAGTACTCAATGGTCTTAGTCAAATTGGAGAAAAAAGATCTGGTGTAACCCAAAGCAGTAGTGGCCATAAAACACCTGAATTAAGACGCCAAGTTGCTGACCTGGAAGGGATGTTGCAAAGGGAGAAACTGGAATTTGAGGAAACTCTTAAAAAGATTTTGAACCAAGAAAAGAGAAATGGCCAACCTGGGATTGACATTCTGGAAATTAATCGATTGTGGAGGCAGTTACTTTTCCAATCATATATGTGGGATCACCGCCTTATTTATGCAGACAGCTTAGCTAATTCCAACAATGAATCTGGTCAAAGCAGTCCAATTTCAGAGGATAAGGAAATACCTAATGATGAAAACGTGACGACTGCAGTCTCCTTGGCAGGAAGGGGATTCAGTAGTGCCGACTCTATTCATGGAGTAGTTGATGCCAAAAATTCTCAGTCAGATGCATTTCATCAAGAAGTTGACATGGCCAAATATAAGCAAAACGAGAAAGAAGAACATAATCTTTCAAACAGCAAAAGCACAAATGATCATTCTGACCTTTTAGAACCTGAATTGGGTGTTCGAAGAGCTCTCTCTGAGGGGCCATTTCCTGTCGTACCTAGTTTGTCTGATACACTTGATGCAAAATGGACAGGTGAAAATCAAAAGGAAAGCACATCTGTAAACCCTGATATATCTATGGCAGATGCTTTGACGCCCACTATACAAAGAGAAACATACTATCTTGGGGATCGCACAGAAGACCAGGGTAGCTCCAAGAGTATCTTTTCTGCTTCTAAAGGTCATGATAATATAGAAGACTCTTTAAGCTGGTTAGGGATGCCCTTTGTAAACTTCTATCGCCAATTTAACAAGAATTTGTTTGCTAGTAGCCAGAAGATTGAAACACTGGCGGACTACAGTCCTGTTTTTGTATCGTCCTTCGGGAAGCTCGAACTCCAAGGTGGTGCAAGGATGCTTCTGCCAATTGGTGCCCAAGACACTGTAATTCCAATATATGATGATGAACCTTCGAGTATTATAGCTTATGCCTTGATGTTACCGGAATATCATTCCCAATTATCTGACGAAGGAGAGAGACTGAAAGAAGGATCTGATTTGGCATCATCCTTTTTTACCGACTCTGTTGCCTTCCAGTCGTTTTCATCTGCCGACGAAGCAGCTTTTGATTCTCAGAAAAGTTTCGGCTCGATCGACGATATGATATTGTCCATGTCTGGGTCTCGTAACTCGCCAATGTTGGACACGTTGTCTTATAGTAAAGCTATGCATGCCAGAGTTTCCTTCGGAGAAGACGGTCCCCTTGGAAAGGTAAAATATTCTGTGACTGGTTACTATGCGAAGCGATTTGAAGCCTTAAGAAGAGTATGCTGTCCTTCAGAGCTCGACTACATAAGGTCTCTAAGTCGCTGTAAGAAGTGGAGAGCTCAAGGTGGGAAGAGTAATGTATTCTTTGCAAAAACCTTGGATGATCGATTTATCATCAAACAAGTTACCAAAACAGAACTTGAATCGTTCATTAAATTTGGTCCTGAATACTTCAAGTACCTTTCTGAATCCATAGGAACAGGAAGTCCAACATGCCTGGCAAAGATTCTTGGCATATACCAGGTTACGTCAAAGCATCTCAAAGGAGGTAAAGAGACAAGGATGGATGTTTTGGTTATGGAGAATCTTCTATATAGGAGGACCGTGACACGACTTTACGATCTCAAAGGATCTTCCAGGTCTCGGTATAATGCAGATAGTACTGGGAAAAACAAAGTTTTGCTGGACCAGAACTTGATTGAAGCAATGCCAACTTCTCCTATTTTTGTGGGAAACAAAGCAAAACGATTGTTAGAAAGAGCGGTCTGGAATGATACTGGTTTTCTTGCATCAATTGATGTAATGGACTATTCATTACTTGTTGGAGTGGATGAAGAAAAGCATGAGTTAGTTCTTGGAATAATTGATTTCATGAGGCAGTATACATGGGACAAGCATCTTGAAACATGGGTGAAAGCTTCAGGAATCCTTGGAGGACCAAAGAACACATCACCAACAGTTATATCACCAAAACAATACAAGAAAAGGTTTAGGAAAGCAATGACCACTTACTTTCTCATGCTTCCAGATCAATGGTCTCCACCATCTATGCCGCCGAGTAATTCTCAGTCTGATTTAGGTGAAGAAAAAGAAAAAGAAAACAATACATAG 5451 0.4133 MRKLDCLSMDALDKTFSELVSIIKSWIPWQSEPANVSRDFWMPDHSCRVCYDCDSQFTLFNRRHHCRLCGRIFCSKCTTNSVPAPFSSQRNLWDEWEKIRVCNFCYKQWEEGVVSVDNSGQVSNLDRTMSASSVASSKTSATANSSNVTLCSMPYSVGSYQQIQPGSCVNKLYQSPKRGKETDREGLSSLGGRNIDLVEDLGDPLPKQCGFSMSRSDDDEDEYGVYPSDSDTRQYPQVNSYYGQAVLDGISNIDGSQKVHPDGENIDANLSSNYNFDAGGLEGTPVIVKNEDEPDICDENEAPSSLYVSEDVDAEPVDFENNGLLWLPPEPEDEEDDREAILFDDDDDNDGRATGEFGYLRNSSSFGSGEYRHKDRSNEEHKKVMKNVVDGHFRALVSQLLQVENLPVEDNNKNSWLEIIISLSWEAANLLKPDMSKGGGMDPAGYSKVKCIACGSRIESVVVKGVVCKKNVAHRRMTSKVDKPRILILGGALEYQRVTNLLSSVDTLLQQEMDHLKMAVARIASHKPDILLVEKSVSRYAQEYLLAKDITLVLNVKRPLLERIARCTGTQIVPSIDHLSSQKWGYCEIFHVEKFPEDLTSVSQGAKKTVKTLMFFEGCPKPLGCTILLRGADMDELKKVKHVVQYAVFAAYHLAMETSFLADEGVSLPEIPLNSLALPNKSSSIQRSISTVPGFTVPGNEKPEVLEPDTGPRRTKSVTVVELASSICNTGSLSNGSSRSLPPGTTLDNSSTLYSSIVGSRDGIPELYHNKLLSKQPLVKETFVVDNTPIVMDDPFVNDSDTAEKIYQGILAGKSQNNHNQKPQNDHSQIYANQLSGSESLSPNHAQNHIEKIVIRNEEPVPQKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDKPLGRFLRDHLFDQSYRCHSCDMPSEAHVHCYTHRQGTLTISVKKLPEIILPGEREGKIWMWHRCLRCPRISGFPPATQRIVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGKMVACFRYASIDVHSVYLPPHKLIFDYGNEDWIKKESDEMVNRAELLFSEVLNGLSQIGEKRSGVTQSSSGHKTPELRRQVADLEGMLQREKLEFEETLKKILNQEKRNGQPGIDILEINRLWRQLLFQSYMWDHRLIYADSLANSNNESGQSSPISEDKEIPNDENVTTAVSLAGRGFSSADSIHGVVDAKNSQSDAFHQEVDMAKYKQNEKEEHNLSNSKSTNDHSDLLEPELGVRRALSEGPFPVVPSLSDTLDAKWTGENQKESTSVNPDISMADALTPTIQRETYYLGDRTEDQGSSKSIFSASKGHDNIEDSLSWLGMPFVNFYRQFNKNLFASSQKIETLADYSPVFVSSFGKLELQGGARMLLPIGAQDTVIPIYDDEPSSIIAYALMLPEYHSQLSDEGERLKEGSDLASSFFTDSVAFQSFSSADEAAFDSQKSFGSIDDMILSMSGSRNSPMLDTLSYSKAMHARVSFGEDGPLGKVKYSVTGYYAKRFEALRRVCCPSELDYIRSLSRCKKWRAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPEYFKYLSESIGTGSPTCLAKILGIYQVTSKHLKGGKETRMDVLVMENLLYRRTVTRLYDLKGSSRSRYNADSTGKNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTGFLASIDVMDYSLLVGVDEEKHELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNTSPTVISPKQYKKRFRKAMTTYFLMLPDQWSPPSMPPSNSQSDLGEEKEKENNT 1816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00847 1816 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1560 1727 IPR002498 GO:0016307|GO:0046488
Trre15g00847 1816 MobiDBLite consensus disorder prediction 1244 1263 - -
Trre15g00847 1816 MobiDBLite consensus disorder prediction 211 235 - -
Trre15g00847 1816 MobiDBLite consensus disorder prediction 1180 1199 - -
Trre15g00847 1816 Gene3D GroEL 459 631 IPR027409 -
Trre15g00847 1816 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1644 1786 - -
Trre15g00847 1816 Pfam TCP-1/cpn60 chaperonin family 400 657 IPR002423 GO:0005524
Trre15g00847 1816 SUPERFAMILY FYVE/PHD zinc finger 39 110 IPR011011 -
Trre15g00847 1816 Coils Coil 1115 1142 - -
Trre15g00847 1816 Pfam FYVE zinc finger 41 109 IPR000306 GO:0046872
Trre15g00847 1816 MobiDBLite consensus disorder prediction 174 197 - -
Trre15g00847 1816 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 32 117 - -
Trre15g00847 1816 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 1486 1642 - -
Trre15g00847 1816 SUPERFAMILY GroEL apical domain-like 459 631 IPR027409 -
Trre15g00847 1816 SMART fyve_4 36 111 IPR000306 GO:0046872
Trre15g00847 1816 CDD PIPKc_PIKfyve 1522 1785 IPR044769 GO:0000285
Trre15g00847 1816 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 44 110 IPR017455 -
Trre15g00847 1816 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1461 1785 IPR002498 GO:0016307|GO:0046488
Trre15g00847 1816 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 31 119 IPR013083 -
Trre15g00847 1816 MobiDBLite consensus disorder prediction 1791 1816 - -
Trre15g00847 1816 CDD FYVE_PIKfyve_Fab1 40 107 - -
Trre15g00847 1816 Gene3D - 1644 1786 - -
Trre15g00847 1816 SUPERFAMILY SAICAR synthase-like 1520 1785 - -
Trre15g00847 1816 SMART PIPK_2 1495 1786 IPR002498 GO:0016307|GO:0046488
Trre15g00847 1816 CDD Fab1_TCP 394 665 - -
Trre15g00847 1816 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 30 1797 - -
Trre15g00847 1816 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 458 631 - -
Trre15g00847 1816 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1482 1642 IPR027484 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00847 Trre-Chr15 6277235 6286202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00847 10 1809 EF-hand Containing Proteins AT3G14270 59.368 0.0 2042
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00847 K00921 - gmx:100819364 2920.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00847 15 6277235 6286202 Trre15g00847 15 6277235 6286202 ECH