Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00846 ATGGGAAAAGTTCATCCCCAAGCAATAGTTTCATCTCCTACTTACAATATCACTTCCAAGCAAGAGACTTTCACTCTATGGATGAAATCTCTTGTATTGAATGGAAAAGGATGTACAGTCTTTGATTCCAATGGTCAAATTGCATATAGAGTTGATAACTATAACTCCAATCATAGAGATCAAGTTCATCTCATGGATCAAAGAGGAAATACTTTGTTTACTATACTTAAAAAGCAATATAAATTGTCTAGGTTTTGGGAGGGTTACAAACTTCCGGCGACAAGGAACGATCAGAAAGGACCAAGTTTTCGAGTTTCTAAAACTTATAGCATCTCTAAATGGGACTCAACTTATGAAGTTGAACTTGGATTGGACAAAACTAAACCATATAATTACAAAATAAAAAGAAGTGCTTGCAAATCATCTTACAAAATATCTGACAAATTTGGAGTGATAATTGCTGAGCTAAGGAGAAAGAAGTCAACTTGTGGAATTGATTTAGGAGATGATGTTTACACAATGGTGGTGGAACCAAATATTGATCTTTCTCTAATTATGGGAGTTGTTGTAGCTTATAACCTTATCAAAAGTAAAATGTAA 600 0.3367 MGKVHPQAIVSSPTYNITSKQETFTLWMKSLVLNGKGCTVFDSNGQIAYRVDNYNSNHRDQVHLMDQRGNTLFTILKKQYKLSRFWEGYKLPATRNDQKGPSFRVSKTYSISKWDSTYEVELGLDKTKPYNYKIKRSACKSSYKISDKFGVIIAELRRKKSTCGIDLGDDVYTMVVEPNIDLSLIMGVVVAYNLIKSKM 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00846 199 SUPERFAMILY Tubby C-terminal domain-like 17 195 IPR025659 -
Trre15g00846 199 Gene3D - 8 198 IPR038595 -
Trre15g00846 199 PANTHER - 21 195 IPR007612 -
Trre15g00846 199 Pfam LURP-one-related 17 190 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00846 Trre-Chr15 6258859 6259842 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00846 - - gmx:100527543 311.997