Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00832 ATGGCATTGCGAGGAGTTTGGCAACTTAAGAAGCTCGTTGTTAGCTACAGCGATTGGGGTGGAAGTAGCAAAGGCATTAGGGCATTTATGGAGTCGCATTTGCCAGCATTTAAGGAGGCGAATCCACAGTTAGAGGTGGACACTGAAATGATTCGTGGTCAGCATCCACATCTGAAGGCTTTTTACAAGAACCATAACGACCGAGTGGTGTGTGTGAAGAATATGGATCCTGAAGAGATACTTCTGCATGCAACCAGGCTAAGGAATGCACTGGGAAGGAAAGTGATTAAGCTGAGGACAAGACATGTAACCAAACACCCTAGTGTGCAAGGTACATGGACAACTGCTTTGAAATATTAG 360 0.4528 MALRGVWQLKKLVVSYSDWGGSSKGIRAFMESHLPAFKEANPQLEVDTEMIRGQHPHLKAFYKNHNDRVVCVKNMDPEEILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00832 119 SUPERFAMILY Thioredoxin-like 8 90 IPR036249 -
Trre15g00832 119 PANTHER 39S RIBOSOMAL PROTEIN L43 1 118 IPR039927 GO:0003735|GO:0032543
Trre15g00832 119 FunFam 54S ribosomal protein L51, mitochondrial 1 119 - -
Trre15g00832 119 Pfam Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain 26 76 IPR007741 -
Trre15g00832 119 Gene3D Glutaredoxin 1 119 - -
Trre15g00832 119 SMART L51_S25_CI_B8_2 18 91 IPR007741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00832 Trre-Chr15 6142544 6143944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00832 K17424 - gmx:100778783 221.476