Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00831 ATGGAGATAACACAGGAAAAGTTGCAGACAGGTTTTGGTTTTGTTGATGGAGTTGACTCCAAGTCTTGTTATATGCAAAAATTTAAACTCTATGAAACTCGTTCGAGATTCTATTTGATCGGAAGAGATAAAAACCGAACGTTTTCGAGGGTATTGAAAATCGACAGGTCAGAGCCATCAGAACTAAATGTCATTGAAGATCCAACACTCTACACCGAAAATGAGTGTATCGATATTTTGACACGCATTAACGAGGGAAATAAGTCCACCGGGGGGCTTAGATTTGTCACAACTTGCTATGGAATCATCGGGTTTGTAAAATTTCTCGAGCCGTACTATATGCTACTGATAACGAAGCGCAGGAAGATCGGCACGGTATGTGGGCATACCATATATGCCATCACGAAGAGTGAGATGATTCCGATTCCTCATCCGAGTGTTCGAACAAGATTGGCTTACTCGAAAGATGAGAACAGATACAAGAAGCTTCTATGCAGTATGGATCTTACAAAGGACTTCTTTTATAGCTACTCATACAACATCATGCTTAGTCTTCAAAAGAACTTATCCGATCATAATGTTACGGGACAATTGTTGTATGAAACACTGTTTGTTTGGAATGAGTTCTTAACTCGTGGAATCAGGAACAATCTGCAGAATACATCCTGGACTGTTGCCTTAGTCTATGGCTTCTTTAAACAGGTTCAACTTTCTACATCTGGCCGTGAGTTCGACTTCATTCTCATTGCTAGGCGTTCAAGGCACTATGCTGGTACCAGATATTTGAAACGTGGAGTCAATGAAAGGGGTAGAGTAGCTAATGATGTTGAGACAGAGCAGATAGTCTTTGCAGATGCTTGTGATGGATCGCCAATGCAAATCAGTTCTGTGGTTCAAATCCGGGGTTCAATCCCTCTCTTCTGGTCTCAGGAAGCCTCTCCACTGAATATAAAACCTGACATTATATTGTCACCGAAGGATGCTCATTATGAAGCCACAAGACTTCATTTTGAGAATCTTGTTAAAAGATATGGAAACCCCATAATCATATTAAACTTGATTAAGACTCGTGAGAAGAAGCCCCGCGAAACTATTCTGCGAACTGAGTTCGCTAATGCTGTTAGGGTTATCAACAAAAATTTGAGTCGGGATGAGCGCCTGAGGTTTCTTCATTGGGATCTGCATCGGCACTCAAGACGGAGCAAAGCCACCAATGTGCTCGGACAATTGGGAAAAGTTGCTTCATTCGCGGTGAACTTAACTGGCATCTTCTACTGTCCAGTTACACCATACATGAGGCAGGAGGGATTATTCCCATATTCCTATTCTGAAAATAACAATGTCATTAATGATTCCTGTGTCAAACCCAAGATCCATCAAAAGGGAGTCTTAAGGACAAACTGTATTGATTGTCTTGACCGCACCAACGTGGCACAATATGCCTATGGACTGGTTGCACTTGGGCGCCAGTTACAAGCATTAGGCTTTGTTGAAACATTGCATCCTGATCTTGATAACCCTTTGGCGAAGGAAGTAATGACAGCTTACGAGTCCATGGGAGACACATTAGCCTTTCAATATGGGGGTTCTGCAGCTCACAACAAGATATTTTCTGAAAAAAGAGGCCAATGGAAAGCAGCAGCTCAGTCCCAAGAACTCATTCGAACCATACAGCGTTATTACAACAATACATATTTGGATGGTTTTAAACAAAAAGCAATTAACATATTCTTGGGGCATTTTCAGCCACAACAGGGAAAACCAGCACTGTGGGAGCTTGATTCAGATCAACATTACAATCTTGGAAGTCATGGCCCAAATTTAGCAGATGGAATTGACGGGTCATTTATTAGAAGATCACAATCAGATGGCAACATTCTCGGTGAAAGTGAAGCTACAATTAGGAACTTGCATGCTCCAGACTGTCAGCACTCATCTGAAAATCCCGATAAGCAATCTCTTTTGGAGTCTACTTCAGACACTATCACCTGTGAAAGTTCTATTTGTCATTGCAGGCAAGTTTTTGGAGGAATGGGTAAGGATCAATATTATGAAAGCGATCATATTTGTTATGAAGAACATGGAGATGCATGTGATTGCTCGAATTTCCTTGATGTGGATTGGCTTTCTTCTTCTGGAAATTCTTGTGAAGAAGAACTACTTGAAAGGTCAACCAGCATTTCTTCGGACAATATTGTGAATGAACTAATGACTGAGGTGCCTGCAAGTGAATCTGGACCTATCTTGAAGGAGAGGCGTAGCGAAGGAGACCTCAAAAAAGATGGAAAATATACTGATAAATTTGAAAATTGGGTGACTCATGGTGAGATGCTTTCCGTTTGA 2343 0.4123 MEITQEKLQTGFGFVDGVDSKSCYMQKFKLYETRSRFYLIGRDKNRTFSRVLKIDRSEPSELNVIEDPTLYTENECIDILTRINEGNKSTGGLRFVTTCYGIIGFVKFLEPYYMLLITKRRKIGTVCGHTIYAITKSEMIPIPHPSVRTRLAYSKDENRYKKLLCSMDLTKDFFYSYSYNIMLSLQKNLSDHNVTGQLLYETLFVWNEFLTRGIRNNLQNTSWTVALVYGFFKQVQLSTSGREFDFILIARRSRHYAGTRYLKRGVNERGRVANDVETEQIVFADACDGSPMQISSVVQIRGSIPLFWSQEASPLNIKPDIILSPKDAHYEATRLHFENLVKRYGNPIIILNLIKTREKKPRETILRTEFANAVRVINKNLSRDERLRFLHWDLHRHSRRSKATNVLGQLGKVASFAVNLTGIFYCPVTPYMRQEGLFPYSYSENNNVINDSCVKPKIHQKGVLRTNCIDCLDRTNVAQYAYGLVALGRQLQALGFVETLHPDLDNPLAKEVMTAYESMGDTLAFQYGGSAAHNKIFSEKRGQWKAAAQSQELIRTIQRYYNNTYLDGFKQKAINIFLGHFQPQQGKPALWELDSDQHYNLGSHGPNLADGIDGSFIRRSQSDGNILGESEATIRNLHAPDCQHSSENPDKQSLLESTSDTITCESSICHCRQVFGGMGKDQYYESDHICYEEHGDACDCSNFLDVDWLSSSGNSCEEELLERSTSISSDNIVNELMTEVPASESGPILKERRSEGDLKKDGKYTDKFENWVTHGEMLSV 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00831 780 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 22 741 IPR043573 GO:0043813|GO:0046856
Trre15g00831 780 Pfam SacI homology domain 100 398 IPR002013 GO:0016791
Trre15g00831 780 ProSiteProfiles Sac phosphatase domain profile. 164 529 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00831 Trre-Chr15 6115353 6125121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g00831 25 778 Acyl Lipid Metabolism Gene Families AT5G20840 54.121 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00831 K22913 - gmx:100806380 1196.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00831 15 6115353 6125121 Trre15g00831 15 6115353 6125121 ECH