Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00825 ATGAGTTTGTTTGGCATGGATTTGAGTAGTGTAGTTAACCATCTTTTCAACCATGTTCATGAAACTTCTTCTAGGGATCATGAAAATCATGAGAGCAGAAGAGGTTCTAATATCCCAGTTGACATTTTGGATACTCCTAAGGAGTATTTGTTTTTTATGGATGTTCCTGGTCTCTCCAAGTCCGAAATTCAGGTAACAGTTGAAGATGAGAACACACTAGTGATAAAGAGCAATGGAAAAAGGAAACGGCAAGATGGTGAAGATGAAGGATGCAAGTACCTTAGGTTGGAGAGAAGAGCACCTCAGAAATTGTTGAGGAAGTTCCGTTTACCAGAGAATGCTAATGTGTCAGCAATTACAGCTAAATGTGAGAATGGTGTTTTGACTGTGGCTGTAGAGAAGCATACTCCACCTCCAAAATCAAAAACAGTTGAAGTTGCAATTGCCTAA 450 0.3933 MSLFGMDLSSVVNHLFNHVHETSSRDHENHESRRGSNIPVDILDTPKEYLFFMDVPGLSKSEIQVTVEDENTLVIKSNGKRKRQDGEDEGCKYLRLERRAPQKLLRKFRLPENANVSAITAKCENGVLTVAVEKHTPPPKSKTVEVAIA 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00825 149 CDD ACD_sHsps-like 41 134 - -
Trre15g00825 149 Gene3D - 4 148 IPR008978 -
Trre15g00825 149 FunFam 17.4 kDa class III heat shock protein isoform A 3 147 - -
Trre15g00825 149 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 31 149 IPR002068 -
Trre15g00825 149 Pfam Hsp20/alpha crystallin family 41 146 IPR002068 -
Trre15g00825 149 SUPERFAMILY HSP20-like chaperones 26 141 IPR008978 -
Trre15g00825 149 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 12 146 IPR031107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00825 Trre-Chr15 6091863 6092595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00825 K13993 - gmx:100803161 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00825 15 6091863 6092595 Trre15g00825 15 6091863 6092595 ECH