Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00789 ATGTCTCCTGTCACTGTCACTGTCCTTATGATTCTGTTGCTGATGATATCTCTGCACACAGAAGCTTCCGTTCATGATTACAAAGGTGAATCTTTCTCTGCCAAAGGTAACGCCTTTGTCTTCCATGGAGGTAGCGAAGGAATTTACTCATCTACCCTCAATGACACTTCTTTCTCACCTTCAATTGCTGACTCTTTCATAAGGTTTGATAAAGTCACATTCCGAAGAAACAAGGAATTATCAAACTTTAGCTCGTGGCCGGTTCAAGCTGTTGTTTTTGAAGTTGAAGATAGAGAGACGATCGGTGGTTCGGCCTACGGGGGTCAAAGGGCTGTCTGTTGTACCGGTGATCTGGCAAAACTCGGAGTGTGCAATGAAGGACAGGTCATTCACCGTCATTCTACAGTGAATCCGGACTGGCCTCAAGTTTACGGCGTCGCTTTTAACATAGATGATGAAGTAGCAGAGCTTCCGTTGAAATCGATACAAATTACAAAAACCGGAATGTATAATTTGTATTTCATCCATTGTGATCCAAGGCTTAAGGAATTGGTTGTAGAAGGGAAAACTGTATGGAAAAATCCCTCCGGTTATCTTCCCGGTAGAATGGCACCTATGAAAATTTTCTTCCAGTTCATGTCTTTTGCATATGTGTTGCTTGGAATCTTTTGGTTCTTTCAATATCTTAGATTTTGGAAGGAAGTATTTCCATTGCAGAACTGCATAACACTGGTGATAACACTAGGCATGTTTGAGATGGCTTTTTGGTACTTTGATTATGCTGAGTTTAGCGAAACAGGAATCAGGCCAACTGGGACGACTGTATGGGCAGTCACCTTCGGGACAGTTAAGAAAACAGTCGCACGGTTGATCATTTTAATTGTTTCAATGGGCTACGGTGTTGTGAGACCTACCCTCGGAGGCCTTACATCAAAGGTTGTTATGCTTGGAGGAACCTTCTTTGTTGCATCTGAAGTGCTTGAATTGGTTGAACATGTCGGTGCAATAAGCGATCTTTCTGGAAAGGCAAAATTTTTCTTGGTTCTTCCTGCTGCAGTATTAGACGTTTTCTTCATTCTTTGGATTTTCACTTCACTATCTGCAACTTTAAATAAGCTTCAGGCCAGAAGGATGATGATAAAATTGGATATGTATAGAAAGTTCACCAATGCTTTGGCAGTAGCTGTGGTTGTATCTGTGGGATGGATATGCTATGAGCTGTATTTCAAATTAAATGATATATACAATGAGCAATGGCAAAATGCTTGGATCATCCCAGCCTTTTGGCAAGTTCTGTCTTACTCTCTCCTTTGTGTCATTTGTGTTGTCTGGGCACCATCTCAAAATTCAACACGATATGCATACCGCGATGATGGGAGTGAAGAGTTCGATAGGGACGATACTACTTTGACACTCATAAAACCATCTTCAATTTTACCAAAGGATGTTAGAAGTGTGCCTGATGCTAGACCAGTACAAGGCAACAATGAAAATTCAAATGATGATTTAGAAGAAGATAAAAGAGAATAA 1530 0.4092 MSPVTVTVLMILLLMISLHTEASVHDYKGESFSAKGNAFVFHGGSEGIYSSTLNDTSFSPSIADSFIRFDKVTFRRNKELSNFSSWPVQAVVFEVEDRETIGGSAYGGQRAVCCTGDLAKLGVCNEGQVIHRHSTVNPDWPQVYGVAFNIDDEVAELPLKSIQITKTGMYNLYFIHCDPRLKELVVEGKTVWKNPSGYLPGRMAPMKIFFQFMSFAYVLLGIFWFFQYLRFWKEVFPLQNCITLVITLGMFEMAFWYFDYAEFSETGIRPTGTTVWAVTFGTVKKTVARLIILIVSMGYGVVRPTLGGLTSKVVMLGGTFFVASEVLELVEHVGAISDLSGKAKFFLVLPAAVLDVFFILWIFTSLSATLNKLQARRMMIKLDMYRKFTNALAVAVVVSVGWICYELYFKLNDIYNEQWQNAWIIPAFWQVLSYSLLCVICVVWAPSQNSTRYAYRDDGSEEFDRDDTTLTLIKPSSILPKDVRSVPDARPVQGNNENSNDDLEEDKRE 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00789 509 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 11 493 IPR009637 GO:0016020
Trre15g00789 509 Pfam Lung seven transmembrane receptor 164 450 IPR009637 GO:0016020
Trre15g00789 509 MobiDBLite consensus disorder prediction 481 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00789 Trre-Chr15 5829447 5832444 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00789 - - gmx:100806912 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00789 15 5829447 5832444 Trre15g00789 15 5829447 5832444 ECH