Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g00780 ATGGCTGGACAATTTTCCAGCTCCGTCGAATTTGGCCTAAACCTCTCAAAACGAATTCATCACATTAAAGGATCGGCTCCGGTTCCGTTATCGGAGATGACGAGATCGTCGGAGGAATTTCTACCGACGGCGCCGATGTGTTATGCGGTTATACCTGATCCACAGATAGTAGATAATCCGGATATTAGAAGTTATCAACCGTATGTGTACGGAGTGTGTAATCCTCCGGCGTTGATACCGCTTCAGCTTCATGGAATTGACATGGAAGTTGAGTGTTGTTTGGATACGGCGTTTGTGACAGTTACAGGACGGTGGCGCGTGCACTGTGTTACCGGAAGTAGTTTGTGTGATTGTCAAGTTGCTATTCCAATCGGAGAGCAGGGTTCACTTCTAGGTGTCGAGGTTGATGATTCTGGAAGATCCTATCACACTGAATTGGTTTCTCTGAAAGATGAAAAAGATAAGCAGAAAATGGCCAAAGCTAAAGATGGATACTTTTTGAAAAACCAAATATACATTGTTAAGATTCCACAGTTTAAGGGAGGTTCCATCTTTTCAGTTAAGATGAAATGGTCCCAGAAAATATTATTTCATGATGGTGAGTTCGGTCTTACCGTCCCTTTCTGTTTTCCTTCATATGTCAACCCTGTTGGAAGAAAAATTTCCAAGAAAGAGAAGATATTTTTGAAATTGAATTCTGGTACTGCAAATGAAGTGTTATGCAAAGCTACTAGTCATCCTCTTAAGGGACTAATGAGCCAAGCTGGAAAATTAAATTTATCATATGAAGCAGAAGTACCAGCTTGGTCAACTACAGACTTCAGTTTCTCGTACACGGTTTCTTCAAGTGACATATTTGGCGGTGTTCTCTTACAATCCCCTTTCCTTCGTGATTTTGATGAAAGAGAGATATTCTGCCTGTATCTTTACCCTGGAAATTGCCAGGATAGAAAGGTTTTTAAAAGGGATGTGGTGTTCGTAATAGATATAAGTGCAAGCATGAAGGGAATTCCTCTTGAAAATTCAAAGAATGCGCTACTAGCATCACTCTCTCAATTAAACCTGCAAGATACTTTTAACATTATAGCTTTCAATGGTGAGTCCTATTTATTCTCGCCGTCGATGGTAACAGCTACAAATGAAGCAATTTTAAAGGCTTCCACGTGGGTTGACACTACTTTTATAGCAAATGGTGGTACTAACATCATGCATCCCTTAACTCAGGCAATGAACTTACTTCGAAAATCAAGGGACTCAGTCCCTCTTATTTTTCTTGTTACTGATGGGGCTGTTGACGATGAGAGAGAGATATGTGAATTTGTGAAAAGCTATGTAACAAGTTTATATTGTAATCACTACTTCCTGCAAATGCTAGCACAAATCGGGAGGGGTCACTATGATGCCGTTTATGATTTAGATACAATTGACTTCCGAATGCAACGGCTATTTAGTACTGCTTCATCAGTTATAGTTGCTGATATCACCATCAAAAGTTTAGAAGGTCTTGATTCACAGGAGCTGTTCCCAAGTCATATTCCTGACCTATCATTTGGAAGTCCATTGATCATATCGGGCAGATACAATGGAACTTTCCCTGAACTAGTTAAGGTTACTGGTACATTTGCAGATATGACCAGCTTTGTAGTGGACCTTAAAGTTAAAAGAGAAAAGGATATGAAACTCACAAATGTCTTTTCAAAGAGACATATAGACCTAGTCACTGCTCATGCTTGGTTATTAGAAAGTGAAGAGCTGGAGGAGAAGGTTTCTAAAATGAGCATTCAAAATAACGTCCCGTCAGAGTATACCTGCTTGGAGATGATTCTTGTCAAGAAAGACGATGTCAAGAAGGCACCGGACAACTTTCTGTTACAAAAGGCATACAGCCAACTTAGCTTCAAGGGATTAGAACATGACATCCCGAAGTTATTTCTTGGAGGATTGAGTCATGGATTTGGTGACTCGAAAGCAACTGCTGAGAACATTCCACCAACAACAAAAGAAGAAAAACAAGGACTATTGGAGATGGCAGCTTCTACTTGTTGCAGTAAAGTAGCTGACACATGTTGTTGCATGTGTATGCTAAAGGCTTGCTCTTTTGTGAATGATGGATGCACCATAGTTTGCACTCAACTTTGTGCAGCATTGGCTTGTTTTGAGTTAATTAAATGTTGTATTGAGCTTTGTGACTGTGATTGCTTGTAA 2205 0.4 MAGQFSSSVEFGLNLSKRIHHIKGSAPVPLSEMTRSSEEFLPTAPMCYAVIPDPQIVDNPDIRSYQPYVYGVCNPPALIPLQLHGIDMEVECCLDTAFVTVTGRWRVHCVTGSSLCDCQVAIPIGEQGSLLGVEVDDSGRSYHTELVSLKDEKDKQKMAKAKDGYFLKNQIYIVKIPQFKGGSIFSVKMKWSQKILFHDGEFGLTVPFCFPSYVNPVGRKISKKEKIFLKLNSGTANEVLCKATSHPLKGLMSQAGKLNLSYEAEVPAWSTTDFSFSYTVSSSDIFGGVLLQSPFLRDFDEREIFCLYLYPGNCQDRKVFKRDVVFVIDISASMKGIPLENSKNALLASLSQLNLQDTFNIIAFNGESYLFSPSMVTATNEAILKASTWVDTTFIANGGTNIMHPLTQAMNLLRKSRDSVPLIFLVTDGAVDDEREICEFVKSYVTSLYCNHYFLQMLAQIGRGHYDAVYDLDTIDFRMQRLFSTASSVIVADITIKSLEGLDSQELFPSHIPDLSFGSPLIISGRYNGTFPELVKVTGTFADMTSFVVDLKVKREKDMKLTNVFSKRHIDLVTAHAWLLESEELEEKVSKMSIQNNVPSEYTCLEMILVKKDDVKKAPDNFLLQKAYSQLSFKGLEHDIPKLFLGGLSHGFGDSKATAENIPPTTKEEKQGLLEMAASTCCSKVADTCCCMCMLKACSFVNDGCTIVCTQLCAALACFELIKCCIELCDCDCL 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g00780 734 ProSiteProfiles VWFA domain profile. 323 499 IPR002035 -
Trre15g00780 734 SUPERFAMILY vWA-like 322 474 IPR036465 -
Trre15g00780 734 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 4 732 - -
Trre15g00780 734 Pfam von Willebrand factor type A domain 323 466 IPR002035 -
Trre15g00780 734 Gene3D von Willebrand factor, type A domain 321 486 IPR036465 -
Trre15g00780 734 SMART VWA_4 321 487 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g00780 Trre-Chr15 5763343 5771282 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g00780 - - gmx:100807956 1145.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g00780 15 5763343 5771282 Trre15g00780 15 5763343 5771282 ECH